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gwa1_scaffold_7313_2

Organism: GWA1_OD1_33_6_very_partial

partial RP 29 / 55 BSCG 34 / 51 MC: 1 ASCG 6 / 38 MC: 1
Location: 1165..1674

Top 3 Functional Annotations

Value Algorithm Source
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_06_33_13_curated UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 169.0
  • Bit_score: 335
  • Evalue 4.00e-89
ECF subfamily RNA polymerase sigma-24 subunit KEGG
DB: KEGG
  • Identity: 32.2
  • Coverage: 171.0
  • Bit_score: 89
  • Evalue 1.30e-15
RNA polymerase, sigma-24 subunit, ECF subfamily similarity UNIREF
DB: UNIREF90
  • Identity: 0.0
  • Coverage: 0.0
  • Bit_score: 100
  • Evalue 3.00e+00

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Taxonomy

R_RIF_OD1_06_33_13 → RIF-OD1-6 → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 510
ATGGATAGTGAAAATGAACAATTTATAAGGATTTATGATCAATATATTGATAAAATATATAGGTTTGTGTATTTAAAGGTTAACTCACAAGAAATAGCTGAAGATATTACCTCTAAGGTTTTTTTGAAGGGTTGGGAAAATTATAGGGGGGAGCCAAAAAAGATTGAAAATATGAGCGCTTTTTTATACCAAATTGCGCGTAATTCCATTGTTGATCACTATAGAGAAAAAAGTAAAACAAAAATAGTTTCGACTGATTTTGCTTCAAAAATAGCTGATAGTAAGGTAAATTTGTACGAAAAAGCAGTTTTAAAAGAGGGCATTGAAACAGTGAAATTGGCTATTGCGAATTTAAAAAAAGACTATCAAGATGTGATTATTTGGCACTATTTAGAAGATATGCCGCCATTAGAAATAGCTGCCATTTTAAATAAACCCGTCGGTACTATCAGGGTGATGATTCATAGGGGCTTAAATTCTCTCAAGAGCGAACTAATAGACGAGGCATAG
PROTEIN sequence
Length: 170
MDSENEQFIRIYDQYIDKIYRFVYLKVNSQEIAEDITSKVFLKGWENYRGEPKKIENMSAFLYQIARNSIVDHYREKSKTKIVSTDFASKIADSKVNLYEKAVLKEGIETVKLAIANLKKDYQDVIIWHYLEDMPPLEIAAILNKPVGTIRVMIHRGLNSLKSELIDEA*