ggKbase home page

04302015_21_scaffold_21992_2

Organism: 04302015_21_Deltaproteobacteria_66_5

partial RP 28 / 55 MC: 2 BSCG 31 / 51 MC: 3 ASCG 10 / 38 MC: 4
Location: comp(261..539)

Top 3 Functional Annotations

Value Algorithm Source
Integration host factor, beta subunit id=4682827 bin=GWA2_Deltaproteo_65_63 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWA2_Deltaproteo_65_63 organism_group=Deltaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 97.8
  • Coverage: 93.0
  • Bit_score: 181
  • Evalue 4.90e-43
ihfB; integration host factor subunit beta; K05788 integration host factor subunit beta similarity KEGG
DB: KEGG
  • Identity: 58.2
  • Coverage: 91.0
  • Bit_score: 122
  • Evalue 8.50e-26
Tax=CG_Delta_02 similarity UNIPROT
DB: UniProtKB
  • Identity: 98.9
  • Coverage: 93.0
  • Bit_score: 182
  • Evalue 3.10e-43

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

CG_Delta_02 → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 279
ATGACGAAGAGCGACCTGGTGGAGAAGCTGTCCGAGTCACTGACGAGCCTGACCAAGAAAGAGTGCGAGGTCATCGTCGACACCGTCTTCCTCAATATGAAGGACGCCCTCCACCGCGGAGAAAAGATCGAGATCCGCGGGTTCGGGAGCTTCACCGTGAGAACCCGGCGGGCGAAAGAGGGCCGCAACCCGAAGACGGGCGAGAAGGTCGCCATCCCCGAGAAACGGATCCCCTTCTTCAAGGTCGGCAAGGAGCTGCGGGAAATGGTCAACGGCTGA
PROTEIN sequence
Length: 93
MTKSDLVEKLSESLTSLTKKECEVIVDTVFLNMKDALHRGEKIEIRGFGSFTVRTRRAKEGRNPKTGEKVAIPEKRIPFFKVGKELREMVNG*