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SCNpilot_expt_1000_bf_scaffold_3242_curated_9

Organism: scnpilot_dereplicated_Afipia_2

partial RP 38 / 55 MC: 2 BSCG 38 / 51 MC: 1 ASCG 11 / 38
Location: 11178..12746

Top 3 Functional Annotations

Value Algorithm Source
2-isopropylmalate synthase {ECO:0000256|HAMAP-Rule:MF_01025, ECO:0000256|SAAS:SAAS00049060}; EC=2.3.3.13 {ECO:0000256|HAMAP-Rule:MF_01025, ECO:0000256|SAAS:SAAS00085331};; Alpha-IPM synthase {ECO:0000256|HAMAP-Rule:MF_01025}; Alpha-isopropylmalate synthase {ECO:0000256|HAMAP-Rule:MF_01025}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 87.4
  • Coverage: 522.0
  • Bit_score: 913
  • Evalue 1.10e-262
2-isopropylmalate synthase n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PA89_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 87.4
  • Coverage: 522.0
  • Bit_score: 913
  • Evalue 7.70e-263
2-isopropylmalate synthase similarity KEGG
DB: KEGG
  • Identity: 86.5
  • Coverage: 513.0
  • Bit_score: 892
  • Evalue 7.60e-257

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Taxonomy

Bradyrhizobiaceae bacterium SG-6C → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1569
ATGAGCACCCAAACCCAGTCCGGCAAGGACCGCGTCGTCATATTCGACACCACCTTGCGCGACGGCGAGCAATGCCCCGGCGCGACCATGACCTTCGAGGAGAAGCTCAACGTCGCCTCCATGCTGGACGACATGGGCGTCGATATCATCGAGGCCGGCTATCCGTTCGCGTCCGATGGCGACTTCGAGGCCGTCCACGAGATCGCCAAGCGCAGCCGCAACGCCGTGATCTGCGGCCTGTCGCGTGCCGCGCAGAAGGACATCGACCGCTGCGCCGAGGCCATCCGTCCCGCCAAGCGCGGCCGCATTCACACCTTCCTGTCCACCTCGCCGCTGCACATGAAATACAAGCTGCAGAAGGAGCCGGACGAGGTCTACGAACTGGTGATCCAGTCGGTGACCCGCGCGCGCAATCACACCGACGACGTCGAGTGGTCGTCGGAAGACGGCACCCGCACCGAGTTCGATTTCCTGTGCCGTTGCGTCGAAGCCGCCATCAAGGCCGGCGCCACCACCATCAACATTCCCGACACCGTCGGCTACAGCGTGCCGGAGGAATATTACGACCTGTTCCGCCGCGTGCGCGAAACCGTGCCGAATTCCGATCAGGCGGTGTTCTCCACCCATTGCCACAACGATCTCGGCATGGCGGTGGCCAACTCGCTGGCCGGCGTGCGCGGCGGTGCGCGGCAGATCGAATGCACCATCAACGGCATCGGCGAGCGCGCGGGCAATGCCGCGCTCGAGGAAGTCGTGATGGCGATCAATGTGCGTGCCGACCGTTTGCCGTTCTTCACCAACATCAACACCAAGGTGCTGACGCAGGCATCCAAGGCGGTGGCGGCGGCGACGTCGTTTCCGGTGCAGTACAACAAGGCCATCGTCGGCCGTAACGCCTTCGCGCACGAGAGCGGCATCCATCAGGACGGCATGCTGAAGAATGCGCAGACCTACGAGATCATGACGCCGGAGTCTGTCGGCGTGAAGCAGACCTCGCTGGTGATGGGCAAGCATTCCGGCCGCGCGGGTTTCATCCACAAGCTGGAAGAGATGGGTTACAAGCTCTCGCGTAACCAGATCGAGGATGCTTTCGTCCGCTTCAAGGCTTTGGCGGACCGCAAGAAGGACATCTACGACGAGGACATCGAGGCGCTGGTCGATGAAGAAATGGCCCAGTCGAACGACCGGATTCATCTGGTGTCGCTGTCGGTCATTGCCGGCACGCGCGGTCCGCAGCGCGCGACCATGAAGCTCGACATTGATGGCCAGGTGAAGATCGAGGAAGCCGAGGGCAACGGCCCGGTGGATGCGGTGTTCAACGCCATCAAGTCGCTGGTGCCGCATGACGCCAAGCTGGAGCTGTATCAGGTCCATGCGGTGACCGCGGGCACCGACGCGCAGGCGGAAGTCTCCGTGCGGCTGTCGCAGGACGGACGCTCTGTTACCGCGCGGGCGGCCGATCCGGATACGCTGGTGGCGTCGGCGCGGGCTTATATCAGCGCGCTGAACAAGATTGTCATGAAGAAGCAGCGCGACATGCCGGCAACGATGGCTCAGGCAGGCCACTGA
PROTEIN sequence
Length: 523
MSTQTQSGKDRVVIFDTTLRDGEQCPGATMTFEEKLNVASMLDDMGVDIIEAGYPFASDGDFEAVHEIAKRSRNAVICGLSRAAQKDIDRCAEAIRPAKRGRIHTFLSTSPLHMKYKLQKEPDEVYELVIQSVTRARNHTDDVEWSSEDGTRTEFDFLCRCVEAAIKAGATTINIPDTVGYSVPEEYYDLFRRVRETVPNSDQAVFSTHCHNDLGMAVANSLAGVRGGARQIECTINGIGERAGNAALEEVVMAINVRADRLPFFTNINTKVLTQASKAVAAATSFPVQYNKAIVGRNAFAHESGIHQDGMLKNAQTYEIMTPESVGVKQTSLVMGKHSGRAGFIHKLEEMGYKLSRNQIEDAFVRFKALADRKKDIYDEDIEALVDEEMAQSNDRIHLVSLSVIAGTRGPQRATMKLDIDGQVKIEEAEGNGPVDAVFNAIKSLVPHDAKLELYQVHAVTAGTDAQAEVSVRLSQDGRSVTARAADPDTLVASARAYISALNKIVMKKQRDMPATMAQAGH*