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SCNpilot_expt_300_bf_scaffold_599_curated_22

Organism: scnpilot_dereplicated_Alicycliphilus_1

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: 17421..18341

Top 3 Functional Annotations

Value Algorithm Source
ribonuclease, rne/rng family; K08300 ribonuclease E [EC:3.1.26.12] similarity KEGG
DB: KEGG
  • Identity: 91.2
  • Coverage: 318.0
  • Bit_score: 545
  • Evalue 1.30e-152
Ribonuclease E {ECO:0000256|HAMAP-Rule:MF_00970}; Short=RNase E {ECO:0000256|HAMAP-Rule:MF_00970};; EC=3.1.26.12 {ECO:0000256|HAMAP-Rule:MF_00970};; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 91.2
  • Coverage: 318.0
  • Bit_score: 545
  • Evalue 6.00e-152
Ribonuclease E n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TZ97_ALIDB similarity UNIREF
DB: UNIREF100
  • Identity: 91.2
  • Coverage: 318.0
  • Bit_score: 545
  • Evalue 4.20e-152

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Taxonomy

Alicycliphilus sp. B1 → Alicycliphilus → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 921
GTGAACGCGGAAGCCACGGCAACGCAGGAGCGCGGCGAACGCGCCCCGCGCAACGGCGAACGCGGCGAACGTGGAGAGCGCCGGGAACGTGGCGAACGCGGTGAACGCAGCCGCGAGCGCGGCCCGCGCACCGTCGACGCGGACGCACCGGCCGCCGCTGCCGCTGCCGACTTCGCCGACACCGCGCCGCTGACCTCGCTGCCCGACCTGGACCTGACGGCCAACGAGACCGCATCCGCCGCGCCCGAAGCCGCCAACGGCGGCGAGGAGCGCCGCGAACGCCGCTCGCGCGACCGCTATGGCCGTGACCGGCGCGAACGCGGCGAGCGCGGCCCGCGCGCTGCCGAGGCGGCGAGCGCGGCCCCGCTGATGGAGTTCGACCTGCCCGCCGCGCAAGCCGAGGCCCCGGCGGACGCTGAATCCGCACCCGAACCGGCACGCCGCAGCTACTTCGCGGCGCCGGCGGCGCAGCCGGCCGCCGAGCCCATCGCCGCGCCCGTGGCGGCAGAGCCTGCCGCAGCAGCCCCGGTGGCGGCCCCCGCCCCCGAGCAGGCCGTGACCGTGGCCGAGGCAGCGCCCGCCAGCGCCGAGCCCGAGACCATCGTGGCCGCCCCTGCCCCCGCGGCACAGGCCGAAGAGCCGGCACCGGCCAGCGGCATGCCGCGCGTGCAGGCCTTCACGCTGCCCGTGGATTCGCTGATCCAGGTGGCGCAGGCATCGGGCCTGGAATGGGTCAACTCCGACGCCGGGAAGATCGCCGCCGCCCAGGCCGCGATCGCCGCCGAGCCCAAGCCCGTGCGCGTGCCGCGCGAGCGGCCGCCCGCGCCGGTGCTCGACGAAGGCCCGCTGGTGCTCGTGGAAACCCGCCGCGACCTGCGCGACATGCAGTTGCCTTTCGAGAAGGAAGGCACGGCCGCCTGA
PROTEIN sequence
Length: 307
VNAEATATQERGERAPRNGERGERGERRERGERGERSRERGPRTVDADAPAAAAAADFADTAPLTSLPDLDLTANETASAAPEAANGGEERRERRSRDRYGRDRRERGERGPRAAEAASAAPLMEFDLPAAQAEAPADAESAPEPARRSYFAAPAAQPAAEPIAAPVAAEPAAAAPVAAPAPEQAVTVAEAAPASAEPETIVAAPAPAAQAEEPAPASGMPRVQAFTLPVDSLIQVAQASGLEWVNSDAGKIAAAQAAIAAEPKPVRVPRERPPAPVLDEGPLVLVETRRDLRDMQLPFEKEGTAA*