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SCNpilot_expt_300_bf_scaffold_315_curated_77

Organism: scnpilot_dereplicated_Alicycliphilus_1

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: 88220..88696

Top 3 Functional Annotations

Value Algorithm Source
Transcription activator effector binding protein n=2 Tax=Alicycliphilus denitrificans RepID=E8TWY5_ALIDB similarity UNIREF
DB: UNIREF100
  • Identity: 98.1
  • Coverage: 158.0
  • Bit_score: 332
  • Evalue 1.70e-88
transcriptional activator ligand binding domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 98.1
  • Coverage: 158.0
  • Bit_score: 332
  • Evalue 5.40e-89
Transcriptional activator ligand binding domain-containing protein {ECO:0000313|EMBL:GAO25484.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.1
  • Coverage: 158.0
  • Bit_score: 332
  • Evalue 2.40e-88

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Taxonomy

Alicycliphilus sp. B1 → Alicycliphilus → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 477
ATGATCGAGACACCGAAGATCATCGACATCAGCCCCGCGCGCACGACGGCCGTGATCCGCGTCTGCTGCCCGCGCGAGGAGCTGCCATGCACCATGGGCCGCGGTGTGCGCGAGCTGCTCGACCGCATCAAGGCCCAGGGCGCGCAGGCCATGGGCCCGCTGTTCACCCACCACCTGCGCGGCCCGACCGACAGCTTCGACTGCGAGGTCGGCGTGGCCGTGGACCGGCCCGTGCGCCCGGCGGGCCACGTGTGCCCGGGCCAATGGCCGGCCATGCGCGTGGCGCGCACCCTGTACCGCGGCCACTACGAAGACCTGCCGCAGGCCTGGGCCGCCCTGCGCGCCTGGATCGCGGCGCAGGGCCTGGCCGCCACCGGCGAGATGTGGGAGTGCTACATCACCGGCCCCGAGATCGGCTCGGATGCCAGCGCCTGGCGCACCGAGCTCTACCTGCCGCTGTGCGGCAAGGGCGCCTGA
PROTEIN sequence
Length: 159
MIETPKIIDISPARTTAVIRVCCPREELPCTMGRGVRELLDRIKAQGAQAMGPLFTHHLRGPTDSFDCEVGVAVDRPVRPAGHVCPGQWPAMRVARTLYRGHYEDLPQAWAALRAWIAAQGLAATGEMWECYITGPEIGSDASAWRTELYLPLCGKGA*