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SCNpilot_expt_300_bf_scaffold_276_curated_5

Organism: scnpilot_dereplicated_Alicycliphilus_1

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: 3524..4564

Top 3 Functional Annotations

Value Algorithm Source
Efflux transporter, RND family, MFP subunit n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8U1Q1_ALIDB similarity UNIREF
DB: UNIREF100
  • Identity: 93.9
  • Coverage: 346.0
  • Bit_score: 633
  • Evalue 1.70e-178
efflux transporter, rnd family, mfp subunit similarity KEGG
DB: KEGG
  • Identity: 93.9
  • Coverage: 346.0
  • Bit_score: 633
  • Evalue 5.50e-179
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:ADV00040.1}; Flags: Precursor;; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 93.9
  • Coverage: 346.0
  • Bit_score: 633
  • Evalue 2.50e-178

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Taxonomy

Alicycliphilus denitrificans → Alicycliphilus → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1041
ATGCGCCACCGCCTTTGGCTGCTTCCCGTGCTTGCCGCTCTCTCGGGGCTGCCGTCCGTGCAGGCCGCCGAGCCCGCCCCGCTGGCCTACCACGCGGTCCAGCCGACCCAGGCCGGCTGGCTGAGCAGCGACGCCAGGGTGGAGGCCGTGCGCGACACCGTGCTGTCGGCGCAGGTGGCGGGGGCCATCGTCGCCCTGCACGTCAAGGCGGGCGACCGGGTGCGGGCGGGCCAGGAGCTGCTGCGCATCGACGCGCGCATGGCCAGCCAGGGGGCGGCGGCCAGCCAGGCGCAGGTGGCGGCGGCGCAGGCGAACCTGCAGGTCGCGGGCAAGGAGTACGAGCGCCAGAAGCAGTTGTTCGCCAAGCGCTACATCAGCCAGGCGGCGCTCGATGCCGCCGAGGCGCAATGGCGCGCGGCCCAGGCGCAGGTGCAGGCGCTGCAGGCGCAGGCCGGCGTGGCGGCGACCCAGTCGGGCCTGCACGTGCTCAAGGCGCCCTATGCCGGCGTGGTGGCCAGCGTGCCCGTGGCGCTGGGCGACATGGCCATGCCGGGCAGGCCATTGGTGTCGGTGTACGACCCTGCGCTGCTTCGCGTGACGGCGTCCCTCGCCGAGGAGCAGGCGCAGCGCCTGCGCTCCGGCGGCGGCGTGCAGGTGGAGATTCCCGGCCTTGCGGCCAGGCGCATGGACGTTGGCGCCGCGCAGATCCAGGTGCTGCCCACGGCAGACCCGCTGAGCCACACCGTGCCGGTGCGCGTGCAGCTGCCAGCGGACCTGCCGGGCGCCCTGCCCGGCTCGTTCGCGCGCCTGTGGTGGCAGGGTGGCGCGGCGGACGCCGGCGGGCGCGTGCTGGTGCCCGCCAAGGCGGTGGTGCGCCGCGCCGAGATGACGGGCGTGTACGTGCGCGGCGGCAACGGGCAGCCGCAGCTGCGCCAGGTGCGCCTGGGGCCGCCCCAGGGCGAGATGGTGGAGGTCCTGAGCGGGCTGCGCGCGGGCGACCAGGTGGCGCTCGAACCCCAGGCCGCGGCCAAGGTGCGCTGA
PROTEIN sequence
Length: 347
MRHRLWLLPVLAALSGLPSVQAAEPAPLAYHAVQPTQAGWLSSDARVEAVRDTVLSAQVAGAIVALHVKAGDRVRAGQELLRIDARMASQGAAASQAQVAAAQANLQVAGKEYERQKQLFAKRYISQAALDAAEAQWRAAQAQVQALQAQAGVAATQSGLHVLKAPYAGVVASVPVALGDMAMPGRPLVSVYDPALLRVTASLAEEQAQRLRSGGGVQVEIPGLAARRMDVGAAQIQVLPTADPLSHTVPVRVQLPADLPGALPGSFARLWWQGGAADAGGRVLVPAKAVVRRAEMTGVYVRGGNGQPQLRQVRLGPPQGEMVEVLSGLRAGDQVALEPQAAAKVR*