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SCNpilot_expt_300_bf_scaffold_385_curated_2

Organism: scnpilot_dereplicated_Alicycliphilus_1

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: 1897..2469

Top 3 Functional Annotations

Value Algorithm Source
TnpA n=1 Tax=Pseudomonas putida RepID=Q51984_PSEPU similarity UNIREF
DB: UNIREF100
  • Identity: 99.5
  • Coverage: 190.0
  • Bit_score: 389
  • Evalue 1.90e-105
TnpA {ECO:0000313|EMBL:AAB03184.1}; TaxID=303 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas putida (Arthrobacter siderocapsulatus).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.5
  • Coverage: 190.0
  • Bit_score: 389
  • Evalue 2.60e-105
tnpA; transposase similarity KEGG
DB: KEGG
  • Identity: 40.9
  • Coverage: 154.0
  • Bit_score: 121
  • Evalue 2.30e-25

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Taxonomy

Pseudomonas putida → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 573
ATGCTGATGCGAGAGCGCGACTTGACGCCTATGAGCCAAATGGTGGTGGAGACCTGGACGAACCAGTTCCCCGAGCTGGGCGCGGCCTACCGCCTCAAGGAAGAGTTCATGAACATCTGGCTGCTGACCGACGAAGTGGACGCCAGAGAGGAATACCAGCGCTGGCAATCCAGCCTGACACCGGAGCAGCGGCCCCAATGGGCGCCGCTTACTACGGCAATGACCAATTGGGAGGCGGAAATCTTCGCCTACTTCGGTGACGGGCAACGCCAGACCAATGCCTTCACCGAGTCGATCAACCGGCAAATGAAAGACCTGAACAGGGTCACGCGGAGCATGTCCTTCGAGATGTTCCGAGCGAAGATGCTGTTCTCAGTCGATCACAAGATGAAGCGCAAGGAAAAGCCGCGCCGGGAATCGCCCTTTGAAATCGGCTACGGCGTCCCTACGGAAGCCGACCTTGCAAGGCTGGCACCCACCATGCTCGACATGGGGGTGCCCATCGGCAAGCTGCTGGAACGCTTCTTGGAGCCTCCCATCAACATCACCCCACCGCCTTCGGAAGCCGGGTAG
PROTEIN sequence
Length: 191
MLMRERDLTPMSQMVVETWTNQFPELGAAYRLKEEFMNIWLLTDEVDAREEYQRWQSSLTPEQRPQWAPLTTAMTNWEAEIFAYFGDGQRQTNAFTESINRQMKDLNRVTRSMSFEMFRAKMLFSVDHKMKRKEKPRRESPFEIGYGVPTEADLARLAPTMLDMGVPIGKLLERFLEPPINITPPPSEAG*