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SCNpilot_expt_300_bf_scaffold_228_curated_109

Organism: scnpilot_dereplicated_Alicycliphilus_1

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: comp(117279..117785)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily protein n=1 Tax=Comamonas testosteroni S44 RepID=D8D2G8_COMTE similarity UNIREF
DB: UNIREF100
  • Identity: 80.4
  • Coverage: 168.0
  • Bit_score: 279
  • Evalue 2.40e-72
RNA polymerase, sigma-24 subunit, ECF subfamily protein {ECO:0000313|EMBL:EFI62675.1}; TaxID=563045 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni S44.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 80.4
  • Coverage: 168.0
  • Bit_score: 279
  • Evalue 3.40e-72
ECF subfamily RNA polymerase sigma-24 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 79.6
  • Coverage: 167.0
  • Bit_score: 269
  • Evalue 1.00e-69

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Taxonomy

Comamonas testosteroni → Comamonas → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 507
ATGCCTTCCTCTTCCAGCCTCCCGCACCGCGACATCACCGCCCTCTACACCACCCACCACGGCTGGCTGCAGGGCTGGCTGCACCGCCGGCTCGGCAATGCCTTCGACGCTGCCGACCTCGCGCAGGACACCTTCGTGCGCATCCTGGGCGTGCGCGATCCGCAGGCCATCGAAACGCCCCGCGCCTACCTGACCACGGTGGCCAAGGGCGTGCTGGTCAACTGGTGCCGGCGCCAGGCGCTGGAGCGCGCCTACCTGGAGGCGCTGGCCCTGCTGCCCGCGCCGGAGGCGCCGTCGCCCGAGCAGCGCGCCGTGGTGCTGGAGACCCTGTACGAGATCGACGCCATGCTCGATGCGCTGCCGCCGCTGGCGCGGCGCGCGTTCCTGCTGTCGCAGCTCGACGGCATGAAGTACGAAGACATCGCCCGGCAGCTCGGCGTGTCGCTCACCAGCGTCAAGCGCTACATGGCCCAGGCCTTCCGCCGCTGCCTGGCCTTGGTGGACTGA
PROTEIN sequence
Length: 169
MPSSSSLPHRDITALYTTHHGWLQGWLHRRLGNAFDAADLAQDTFVRILGVRDPQAIETPRAYLTTVAKGVLVNWCRRQALERAYLEALALLPAPEAPSPEQRAVVLETLYEIDAMLDALPPLARRAFLLSQLDGMKYEDIARQLGVSLTSVKRYMAQAFRRCLALVD*