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SCNpilot_expt_300_bf_scaffold_354_curated_33

Organism: scnpilot_dereplicated_Alicycliphilus_1

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: comp(31179..31997)

Top 3 Functional Annotations

Value Algorithm Source
tRNA pseudouridine synthase A; K06173 tRNA pseudouridine38-40 synthase [EC:5.4.99.12] similarity KEGG
DB: KEGG
  • Identity: 98.9
  • Coverage: 272.0
  • Bit_score: 569
  • Evalue 5.90e-160
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridylate synthase I {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA-uridine isomerase I {ECO:0000256|HAMAP-Rule:MF_00171}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.9
  • Coverage: 272.0
  • Bit_score: 569
  • Evalue 2.60e-159
tRNA pseudouridine synthase A n=2 Tax=Alicycliphilus denitrificans RepID=E8TYG9_ALIDB similarity UNIREF
DB: UNIREF100
  • Identity: 98.9
  • Coverage: 272.0
  • Bit_score: 569
  • Evalue 1.90e-159

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Taxonomy

Alicycliphilus sp. B1 → Alicycliphilus → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 819
ATGAGGGTGGCCCTGGGCGTCAGCTACAACGGCCAGGCCTACAGCGGCTGGCAAAGCCAGCCCAGCGGCAACACCGTGCAAGACCATCTCGAAGCGGCCCTGGGCCGCTTCGCCACTCAGAAGGTGGCGACGATCTGCGCCGGCCGCACGGACGCGGGCGTGCACGGCCTGATGCAGGTCGTGCACTTCGACACCGGGCTGCAGCGCGCGCCGTTCTCCTGGGTGCGCGGCACCAACACCTTCCTGCCGCCCGGCATCGCCGTGCAATGGGCGCAGCCCGTGCCCGACGCCTTCCACGCGCGCGCCTGCGCCGTGGCGCGCCGCTATGCCTACGTGCTGCTGCAGTCGCCCGTGCGCCCCAGCGTGGAGGCCGGGCGCGTGGGCTGGGTGTTCCATGAACTCGACGGGCAGGCCATGCAGGACGCCGTGCAGCACCTGCTGGGCGAGCACGACTTCAGCTCGTTCCGCGCCAGCGCCTGCCAGGCCAAGTCGCCCGTCAAGACGCTGCACCGCATCGCCATCACGCGCCGCGGTCCGGCCGACGGCCCCTCCCTGCACGGCTGCGCGCCCTGCTACTGGCGCTTCGAGTTCGAAGGCAACGCCTTCCTGCACCACATGATCCGCAACATCATGGGCTGCATCGTCGCCATCGGCCAGGGGCTGTACCCGCCAGAGTGGATGCGCCAGGTGCTCGACGCCCGCTCGCGCGACGCCGCGGCGCCCACGTTCTCGCCCGATGGCCTGTACTTCCTGGGGCCGGTGTACGCACCCGAGTGGGGCCTGCCCACGCGCACGGCTGCGTATGATTGGCTGCCATGA
PROTEIN sequence
Length: 273
MRVALGVSYNGQAYSGWQSQPSGNTVQDHLEAALGRFATQKVATICAGRTDAGVHGLMQVVHFDTGLQRAPFSWVRGTNTFLPPGIAVQWAQPVPDAFHARACAVARRYAYVLLQSPVRPSVEAGRVGWVFHELDGQAMQDAVQHLLGEHDFSSFRASACQAKSPVKTLHRIAITRRGPADGPSLHGCAPCYWRFEFEGNAFLHHMIRNIMGCIVAIGQGLYPPEWMRQVLDARSRDAAAPTFSPDGLYFLGPVYAPEWGLPTRTAAYDWLP*