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SCNpilot_expt_300_bf_scaffold_376_curated_16

Organism: scnpilot_dereplicated_Alicycliphilus_1

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: 12950..13450

Top 3 Functional Annotations

Value Algorithm Source
prepilin-type cleavage/methylation; K08084 type IV fimbrial biogenesis protein FimT id=12553916 bin=BDI species=Comamonas testosteroni genus=Comamonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 68.9
  • Coverage: 167.0
  • Bit_score: 245
  • Evalue 4.90e-62
prepilin-type cleavage/methylation; K08084 type IV fimbrial biogenesis protein FimT similarity KEGG
DB: KEGG
  • Identity: 54.8
  • Coverage: 166.0
  • Bit_score: 189
  • Evalue 7.70e-46
General secretion pathway protein H {ECO:0000313|EMBL:KGG93396.1}; TaxID=285 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni (Pseudomonas testosteroni).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 54.5
  • Coverage: 167.0
  • Bit_score: 189
  • Evalue 3.50e-45

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Taxonomy

Comamonas testosteroni → Comamonas → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 501
ATGGTGACCGTGGCCATCCTGGCGGTCCTCGCCGCGCTTGCGGCGCCCAGCTTCACCTCCATCATCGAACGCTGGCGCGTGCAGCAGGCGGTCGAAAGCATGACGTCCACCCTGTATTACGCGCGCTCCGAGGCCGTCAAGCGCGGCGGGCGCATCGGCATACAGAAAATCGCGCAGGACACGGATGGCTGCAAGCTGGCAAGCACCAACGAAGAATGGGGCTGTGGCTGGTTCGTGTTCGTGGACAGCGACGACGACGGCAAGTGGAAGTCCGGCGAAGAGATTCTTCAAACCCTCGCCACGCCCGCCAACACCAACGTCATCCACAAATCCGGCGGCACCAACATCAAGGTCGATCGCTACGGAATGACGAGCGGACTGAACGCCAAGGGCTTCATTTTCTCGCCTGAGCCCGCCGGCATCTCATCCTCGGCCACCCGCGGCATCTGCATGGGCGCAGGGGGCCGCATCCGAGTCATCAAGGAAGTTCCATGCCAATGA
PROTEIN sequence
Length: 167
MVTVAILAVLAALAAPSFTSIIERWRVQQAVESMTSTLYYARSEAVKRGGRIGIQKIAQDTDGCKLASTNEEWGCGWFVFVDSDDDGKWKSGEEILQTLATPANTNVIHKSGGTNIKVDRYGMTSGLNAKGFIFSPEPAGISSSATRGICMGAGGRIRVIKEVPCQ*