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SCNpilot_expt_300_bf_scaffold_376_curated_25

Organism: scnpilot_dereplicated_Alicycliphilus_1

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: comp(22533..23540)

Top 3 Functional Annotations

Value Algorithm Source
dihydrouridine synthase DuS; K05541 tRNA-dihydrouridine synthase C [EC:1.-.-.-] similarity KEGG
DB: KEGG
  • Identity: 95.3
  • Coverage: 339.0
  • Bit_score: 642
  • Evalue 6.70e-182
tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621}; EC=1.-.-.- {ECO:0000256|PIRNR:PIRNR006621};; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 95.3
  • Coverage: 339.0
  • Bit_score: 642
  • Evalue 3.00e-181
tRNA-dihydrouridine synthase n=2 Tax=Alicycliphilus denitrificans RepID=E8TZF6_ALIDB similarity UNIREF
DB: UNIREF100
  • Identity: 95.3
  • Coverage: 339.0
  • Bit_score: 642
  • Evalue 2.10e-181

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Taxonomy

Alicycliphilus denitrificans → Alicycliphilus → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1008
ATGATTACCAAGGCACCAGTCCACAAGCCCCTGCTGCTGGCCCCCATGGAGGGGCTGCTGGACTTCGTGCTGCGCGACGTGCTGACGCGCGTGGGCGGCGTGGACCGGTGCGTGTCCGAGTTCATCCGCGTCACGGGCAGCCTGCTGCCCGACAAGGTGTTCCTGCGCTACCTCCCCGAGCTCAGGAACGGCGGGCGCACGCTGGCCGGCGTGCCCGTGCGCGCCCAGCTGCTGGGCTCCGACCCGGCCAGCATGGCCGAGAACGCCGCCCGCCTGGCGGCCCTGGGCCCCGAGGGCATAGACCTGAACTTCGGCTGCCCGGCCAGGACCGTGAACCGCCACGGCGGCGGCGCGGCCCTGCTGCGCGAGCCCGAGGCCATCGCCGCCGTGGTGGCCGCCGTGCGCCGCGCCGTGCCAGCGCACCTGCCCGTGTCGGCCAAGATGCGCCTGGGCTATGACGACGCCGGCCGCGCGCGCGAATGCGCCCAGGCCATGGAGCAGGGCGGCGCGTGCGAGCTGGTGGTGCACGCGCGCACCAAGGCCGACGGCTACCGGCCGCCCGCGTACTGGGAGCAGATACCTGCGATTCGCGAGGCCGTGGCCATCCCCGTGGTGGCCAACGGCGAGATCTGGACCGTGGCCGACGCGCTGCGCTGCCGCGGCGTGTCGGGCTGCGATGCCCTCATGCTGGGCCGCGGCATGGTGGCCGACCCCGGGCTGGCGCTGGCCATCCGCGCGCAGGACGCGGGGCAGGGCGCCTTTGCCCTGCCCTGGGCGGTCCTGCTGCCGCAGCTGGCGCGTTTCTGGCAGCTGGTGTGCGAAGACCTGGAGCCGCGCCAGCGCGCCGGCCGGCTCAAGCAATGGCTGAACCTGCTGCGCCGGCGCTACCCCGAGGCCCAGCAGGCCTTCGACGAGGTGCGCGTGATGACCGAGCAGCGCGCCATCAGCGCCTGGGTGGCGCGGGCAGCTACAGCAGATGGTCGGGCGCCAGCGGGCCCAGCAGTTTGA
PROTEIN sequence
Length: 336
MITKAPVHKPLLLAPMEGLLDFVLRDVLTRVGGVDRCVSEFIRVTGSLLPDKVFLRYLPELRNGGRTLAGVPVRAQLLGSDPASMAENAARLAALGPEGIDLNFGCPARTVNRHGGGAALLREPEAIAAVVAAVRRAVPAHLPVSAKMRLGYDDAGRARECAQAMEQGGACELVVHARTKADGYRPPAYWEQIPAIREAVAIPVVANGEIWTVADALRCRGVSGCDALMLGRGMVADPGLALAIRAQDAGQGAFALPWAVLLPQLARFWQLVCEDLEPRQRAGRLKQWLNLLRRRYPEAQQAFDEVRVMTEQRAISAWVARAATADGRAPAGPAV*