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SCNpilot_cont_300_bf_scaffold_1440_curated_2

Organism: scnpilot_dereplicated_Alphaproteobacteria_6

near complete RP 45 / 55 BSCG 43 / 51 MC: 1 ASCG 10 / 38
Location: 1170..2003

Top 3 Functional Annotations

Value Algorithm Source
Type II and III secretion system protein n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HPM3_PARL1 similarity UNIREF
DB: UNIREF100
  • Identity: 48.1
  • Coverage: 241.0
  • Bit_score: 197
  • Evalue 1.50e-47
Type II/IV secretion system secretin RcpA/CpaC,associated with Flp pilus assembly {ECO:0000313|EMBL:CDO59910.1}; TaxID=1458461 species="Bacteria; Proteobacteria; Alphaproteobacteria; Candidatus Phaeomarinobacter.;" source="Candidatus Phaeomarinobacter ectocarpi.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 48.3
  • Coverage: 259.0
  • Bit_score: 226
  • Evalue 5.50e-56
type II and III secretion system protein; K02280 pilus assembly protein CpaC similarity KEGG
DB: KEGG
  • Identity: 48.1
  • Coverage: 241.0
  • Bit_score: 197
  • Evalue 4.70e-48

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Taxonomy

Candidatus Phaeomarinobacter ectocarpi → Candidatus Phaeomarinobacter → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 834
ATGCGAAGGGGATTGATTGCCGGCGTTCTCGCAGGCGTCTTGGCGATCGCGGGGGGATCGGAAGGGTTGGCCGCACCGGCGCACAAGTCGCCCGCGGCCACCAGGGTGGTCAAACTGTCGACGCAAGGCAATTCCGCACAGCGGATGAACTTGGCCCTCAGCAAGGCGGCCATCGTCGAACTGGATACCGATGCACGCGACGTGCTGGTTTCCAATCCGGATATTGTCGATGCGGTGGTGCGGTCTCCGCGCCGCATCTATCTGCTCGGCATGAAAACCGGCCAGACCAATGCGTTTTTCTTCGATGCCTCGGGCCGTCAGATCCTCTCGCTCGACATCCGCGTTGAAAAGGATGTGACGGAGCTTCAGGCGATGATCCGTTCCGACATGCCGGATTCCAGCATCAAGGTCGGCGCCCTGAACGACAATGTGGTGCTGACCGGCACGGTGGCGAACGCCATGGCCTCGACCCGTGCCCAGGATCTTGCCGCCCGCTTTGCCGGTGGCGCGGACAAGGTCGTGAACATGCTGAAAGTCGATGCCAAGGAACAGGTGATGCTGAAGGTCCGCGTGGCCGAAATGCAGCGTCAGGTGGCCAAGCAGTTCGGTATCGACCTTGCCACCGCCGGCGTGGCCGGCGGTGTGCCGTTCGCGGCCTCCACCTCCAATCCGTTCGGGCTTCTGGGCCGCGCACTTAGCGATCTGTCCGGTATCGGCGTGGGGCAGCTTTGCCAGCCCAGCACCGCCGCCGCCACCAGGCGCCANNNNNNNNNNNNNNNNNNNAGGCGCTGGAAACGGTCGGCCTCGTCCACATGCTGGCGGAGCCGAATTTGA
PROTEIN sequence
Length: 278
MRRGLIAGVLAGVLAIAGGSEGLAAPAHKSPAATRVVKLSTQGNSAQRMNLALSKAAIVELDTDARDVLVSNPDIVDAVVRSPRRIYLLGMKTGQTNAFFFDASGRQILSLDIRVEKDVTELQAMIRSDMPDSSIKVGALNDNVVLTGTVANAMASTRAQDLAARFAGGADKVVNMLKVDAKEQVMLKVRVAEMQRQVAKQFGIDLATAGVAGGVPFAASTSNPFGLLGRALSDLSGIGVGQLCQPSTAAATRRXXXXXXXRRWKRSASSTCWRSRI*