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SCNpilot_cont_300_bf_scaffold_2235_curated_13

Organism: scnpilot_dereplicated_Alphaproteobacteria_6

near complete RP 45 / 55 BSCG 43 / 51 MC: 1 ASCG 10 / 38
Location: comp(12898..13698)

Top 3 Functional Annotations

Value Algorithm Source
Indole-3-glycerol phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00134, ECO:0000256|SAAS:SAAS00046689}; Short=IGPS {ECO:0000256|HAMAP-Rule:MF_00134};; EC=4.1.1.48 {ECO:0000256|HAMAP-Rule:MF_00134, ECO:0000256|SAAS:SAAS00046705};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 66.9
  • Coverage: 266.0
  • Bit_score: 344
  • Evalue 1.80e-91
trpC; protein TrpC; K01609 indole-3-glycerol phosphate synthase [EC:4.1.1.48] similarity KEGG
DB: KEGG
  • Identity: 67.4
  • Coverage: 261.0
  • Bit_score: 334
  • Evalue 2.40e-89
Indole-3-glycerol phosphate synthase TrpC n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CHX7_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 66.9
  • Coverage: 266.0
  • Bit_score: 344
  • Evalue 1.20e-91

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 801
GTGACCATCCTCTCCCGCATCGCAGCCTGTAAGCGTGAAGAAATCGCCGCCGCCAGGGCACGCATTGCGCAATCGGAGATCGAGGCGCGTGCCGAACGCGCCGCGCCGGTGCGCGCCTTTCGTGCCGCCCTGGAAGCAAAACGCAGCCAGGGTCAATTCGGCCTGATTGCGGAGATCAAGAAAGCCAGCCCGTCAAAGGGACTGATCCGGGCCGATTTCGATCCACCTCAACTGGCGCGTGCCTATGAAGCCGGTGGTGCGGCGTGCCTTTCCGTTCTGACCGATACACCATCGTTTCAGGGCGCGCCGGAATATCTGACCGCAGCCCGTGCGGCCACAACCCTGCCGGCCCTGCGCAAGGATTTCATGTTCGAGCCCTATCAGGTGGCGGAAGCGCGCGCCTGGGGCGCCGATTGCATTCTTGTCATTATGGCGGCGGTGACGGACGCCGAAGCGCGCGCGCTGTGCGACGCGGCGCAGCGCTGGAACATGGATGTGCTGGTCGAAGTGCATGACGAAAGCGAGTTGCAGCGCGCCCTGCCCCTTTCGCCACGGATGATCGGGATCAACAACCGCAACCTGAAAACATTCGTGACCGACATCGCGGTGACGTTGCAACTAGCCTCCAAGGTTCCCAAAGATTGCCTGATCGTGGCGGAAAGCGGGCTTTCCACGCGGGCGGATCTGGAGCGGCTGGCCGGTGCTGGTATCACCACCTTCCTGATCGGGGAAAGCCTGATGCGGCAGGATGACGTAGCCGCCGCGACGAAAACCCTGATCGGCGCTAACATCGGCGGATGA
PROTEIN sequence
Length: 267
VTILSRIAACKREEIAAARARIAQSEIEARAERAAPVRAFRAALEAKRSQGQFGLIAEIKKASPSKGLIRADFDPPQLARAYEAGGAACLSVLTDTPSFQGAPEYLTAARAATTLPALRKDFMFEPYQVAEARAWGADCILVIMAAVTDAEARALCDAAQRWNMDVLVEVHDESELQRALPLSPRMIGINNRNLKTFVTDIAVTLQLASKVPKDCLIVAESGLSTRADLERLAGAGITTFLIGESLMRQDDVAAATKTLIGANIGG*