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SCNpilot_expt_1000_bf_scaffold_2738_curated_3

Organism: scnpilot_dereplicated_Alphaproteobacteria_8

near complete RP 41 / 55 BSCG 41 / 51 MC: 2 ASCG 7 / 38
Location: comp(1175..1849)

Top 3 Functional Annotations

Value Algorithm Source
Regulatory protein TetR n=1 Tax=Rhodomicrobium vannielii (strain ATCC 17100 / ATH 3.1.1 / DSM 162 / LMG 4299) RepID=E3I0D7_RHOVT similarity UNIREF
DB: UNIREF100
  • Identity: 45.1
  • Coverage: 233.0
  • Bit_score: 189
  • Evalue 3.30e-45
Uncharacterized protein {ECO:0000313|EMBL:CPR20079.1}; TaxID=1578971 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Filomicrobium.;" source="Filomicrobium sp. Y.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 47.6
  • Coverage: 225.0
  • Bit_score: 195
  • Evalue 8.50e-47
regulatory protein TetR similarity KEGG
DB: KEGG
  • Identity: 45.1
  • Coverage: 233.0
  • Bit_score: 189
  • Evalue 1.00e-45

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Taxonomy

No taxonomy information

Sequences

DNA sequence
Length: 675
ATGATCGACACCACCACACCCAAGGGCCGCATACTCGCCGCCGCCCTGGATCTCGCCGCGGAGCGGCCGTGGCGCGACATCTCGCTCGCCGACATTGCCGAGAAGGCGGAAATCCCCCTCGTCGATCTCAAGGCCTCCTTCGACAGCAAGGCCGAGATGCTCGTCGCCTTCAGCGGGCTCGTCGATGACGAGATGCTGCGCCGCGCGCCGCGCCGCGCACCCGACCAGAGCACGCGCGATGCGCTTTTCGAGGTCATCATGAGCCGCTTCGATGCGCTCGGCCCCTACCGCGCGGCATTGAAGTCCATCGCAGGCAGCGGCTTTGCGGACATCGCCCACCTGCGCGCGGTCATGAATGCGCAGCACTGGATGCTTGCAGCGGCAGGCGTCAACGCGGAAGGCCCTGCGGGGGTCGCGCGCGCGGCTGGTCTCGCGACGGTCTATGCGAGCGTCTTCCGCACGTGGCTCGACGATGAGGACCCAGGCTTTGCCCGCACGATGGCGGCACTTGACCGCCGCCTGCGCCGCGGCGAGAGCGCGCTCAACCGCATGGATGAAGTGTGCAGCGGCGCTCAGCGCTTAGCGTCAGCCATCCTGCCGAGCATCTTCGGGCGCCGGACCAAACCTCGGCCTCAGCCCGAGGCGCCTGCGCCGACGCCGCCACCCGCCGCCTAA
PROTEIN sequence
Length: 225
MIDTTTPKGRILAAALDLAAERPWRDISLADIAEKAEIPLVDLKASFDSKAEMLVAFSGLVDDEMLRRAPRRAPDQSTRDALFEVIMSRFDALGPYRAALKSIAGSGFADIAHLRAVMNAQHWMLAAAGVNAEGPAGVARAAGLATVYASVFRTWLDDEDPGFARTMAALDRRLRRGESALNRMDEVCSGAQRLASAILPSIFGRRTKPRPQPEAPAPTPPPAA*