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SCNpilot_expt_1000_bf_scaffold_3098_curated_14

Organism: scnpilot_dereplicated_Alphaproteobacteria_8

near complete RP 41 / 55 BSCG 41 / 51 MC: 2 ASCG 7 / 38
Location: comp(12189..13241)

Top 3 Functional Annotations

Value Algorithm Source
Extracellular solute-binding protein, family 7 id=2247801 bin=GWA2_Methylomirabilis_73_35 species=Rhizobium sp. PDO1-076 genus=Rhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis similarity UNIREF
DB: UNIREF100
  • Identity: 64.9
  • Coverage: 348.0
  • Bit_score: 477
  • Evalue 1.20e-131
TRAP dicarboxylate transporter subunit DctP similarity KEGG
DB: KEGG
  • Identity: 58.3
  • Coverage: 336.0
  • Bit_score: 404
  • Evalue 2.50e-110
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 67.5
  • Coverage: 338.0
  • Bit_score: 488
  • Evalue 5.80e-135

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Taxonomy

R_Rokubacteria_73_56 → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 1053
ATGAGGTCGCGATTGGGTTTGCATCTCGGATTGGCGGCGCTGACGCTGGCGGCTGCGCTGTCGGCATGGCCCGTGGTCAGTGCGGCGCAGGACGTGACACTGCGCATCCACCACTTCCTGCCCGCGCCTGCACCCGTGCCGAAGAACTTCATCACGCCCTGGGCCGAGAAGGTGACCAAGGAAGCGGGCGGCAAGCTCAAGGTCGAGATCTATCCGTCGATGCAACTCGGTGGGCGGCCGCCGGCGCTGATCGATCAGGCGCGCGATGGCGTCGTCGATATCGTGTGGACCCTGACCGGGTACACGCCGGGCCGTTTCCCGGGATCGGAGGTTTTCGAGCTGCCGTTCATGCCGGCGAGCGGCGAGGCCACGAGCCAGGCGGCGTGGGAGTTCTACGAGAAATACCTCAAGAAGGAGCTCGATAGCGTCCACATCGTCGCCGTCCATGTGCATGGGCCGGGGCTGCTGCACGTCAAGGGCAACGGCGTGACCAAGCTCGAGGACATGAAGGGCCTGAAGCTGCGCGGGCCGACGCGACAGGCGACGGCATTGATCTCCGCGCTTGGCGCGACGCCGGTCGGCATGCCGGTGCCGGCTATGCCCGAGGCGCTCTCGAAGGGCGTGATCGACGGCACCGTCATTCCCTGGGAGGTGACGACACCCCTCAAGGTCGCCCAGCTCGTGCAGTCGCACACGAACTTCACGGGAAGCCGTGGCCTCTACACGAGCTTCTTTCTCTTCGCGATGAACAAGGCGAAGTACGACGGTCTGCCGGCCGACATCAAGAAGGTGATCGACGCCAATAGCGGCCTTGCGACCTCGAAGTGGGTTGGCCGGGTCATGGATGAAGGCGATGCGCCCGGCATCGAGGCCGCGAAGGCCGCCGGCAACAAGATGATCACGCTGGATGCCGCCGAAACGGCCCGCTGGAAGGCGGCGGCGGCACCGATCACAGAAGCCTGGGTCAAGGAGATGACCGAGAAGGGGCTTCCGGCCGCGGCCATGCTGAAGGACGCGCGCGCCATGATCGCCAAGTACGCCGGCGCCGAGTGA
PROTEIN sequence
Length: 351
MRSRLGLHLGLAALTLAAALSAWPVVSAAQDVTLRIHHFLPAPAPVPKNFITPWAEKVTKEAGGKLKVEIYPSMQLGGRPPALIDQARDGVVDIVWTLTGYTPGRFPGSEVFELPFMPASGEATSQAAWEFYEKYLKKELDSVHIVAVHVHGPGLLHVKGNGVTKLEDMKGLKLRGPTRQATALISALGATPVGMPVPAMPEALSKGVIDGTVIPWEVTTPLKVAQLVQSHTNFTGSRGLYTSFFLFAMNKAKYDGLPADIKKVIDANSGLATSKWVGRVMDEGDAPGIEAAKAAGNKMITLDAAETARWKAAAAPITEAWVKEMTEKGLPAAAMLKDARAMIAKYAGAE*