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SCNpilot_expt_1000_bf_scaffold_2076_curated_9

Organism: scnpilot_dereplicated_Alphaproteobacteria_8

near complete RP 41 / 55 BSCG 41 / 51 MC: 2 ASCG 7 / 38
Location: comp(5853..8159)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI000362FF5E similarity UNIREF
DB: UNIREF100
  • Identity: 79.3
  • Coverage: 774.0
  • Bit_score: 1191
  • Evalue 0.0
RNA-binding protein {ECO:0000313|EMBL:AHB49214.1}; TaxID=1029756 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium nitrativorans NL23.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 78.2
  • Coverage: 771.0
  • Bit_score: 1179
  • Evalue 0.0
S1 RNA-binding domain-containing protein; K06959 uncharacterized protein similarity KEGG
DB: KEGG
  • Identity: 66.2
  • Coverage: 760.0
  • Bit_score: 994
  • Evalue 1.60e-287

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Taxonomy

Hyphomicrobium nitrativorans → Hyphomicrobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2307
ATGAACAGCATCAATCAGCGCATCGCGACCGAGCTTGGCGTCGGCGTCGCCCAAGTGGCCGCGGCCGTGGAGCTGCTGGGCGAAGGCGCCACCGTGCCGTTCATCGCGCGCTATCGCAAGGAGAAGACGGGTAGCCTCGACGATACACAGCTCAGGAAACTGGAGGAGCGCCTCGGCTACCTGCGCGAGCTCGAAGACCGCCGCGCCACCGTGCTCAAGAGCATCGAGGAACAGGGCAAGCTCACGGCGGATCTTGCGCGTGCCGTCAATGCCGCCGAGACCAAGGTCGCGCTGGAGGACCTGTATGCGCCCTACCGGCCCAAGCGCCGCACCAGGGCGCAGATTGCGCGCGAGGCGGGCCTCGAGCCTCTGGCCGACGCGCTGCTCGCCAACCCAACGCTCGACCCGCAGGCAGAAGCCGCGAAGTTCATCGCAGAGGACAAGGGTATTGCCAACGCCAAGGCGGCGCTCGACGGTGCGCGGCACATCCTCGTCGAACGCATGGCCGAGGAGCCGAAGCTCGTCGGCACATTGCGCGAATGGGAGTGGAGCGAGGGCGTCCTCACATCCAAGGTCCTCGAGGGCAAGAAGGAGGAAGGTGCGAAGTTCGCCGACTACTTCGACTTCGGCCAGAGCATAAAGGACATCCCCTCGCATCGCGCGCTCGCCATGCTGCGCGGCCGCAACGAAGGTGTTCTCGATCTCCACATCGATGTGCCGCACCAGGTCGACAGGCCCCACCCGGCCATCCTGAAGGTGATGACCGCATTCAACATCGCCGAGCGCGGGCGCCCCGCTGACGCGTGGCTTGCCGATACGGCGCGCCTCGCCTGGAAGGGCCGCATGGCCGCATCCATCGGCGCCGACCTGTTGACGCGCCTCAAGGAGCGGGCTGACGCCGAGGCCATCTCCGTCTTTTCCAAGAACCTGAAAGACCTGCTGCTGGCCGCGCCGGCTGGCCCACGCGTCACCATGGGGCTCGATCCAGGCTTCCGCACGGGCGTGAAGGTTGCGGTGGTGGATGCCACTGGCAAGCTGGTCGATACCGACACTATCTATCCGCACGAGCCCAAGCGCGATTGGCGCGGCGCGCTGGCGACGCTGGCCGCGCTTTGCATGAAGCACAAGGTGGACCTTGTCAGTGTCGGCAATGGCACGGCAAGCNNNNNNNNNNNNNNNNNNNNNNNNGAGCTCATCGCCAAGACACCGCACCTGACGCTTACCAAGGTCATGGTGTCGGAAGCCGGCGCGTCCGTCTATTCGGCCTCGGAGCTGGCGGCGAAGGAATTTCCGGATGTCGATGTGTCGCTGCGCGGCGCCGTCTCCATTGCGCGGCGCCTGCAGGACCCGCTGGCGGAGCTTGTGAAGATCGAGCCCAAAGCCATCGGCGTTGGCCAGTACCAGCACGACGTCGACCAGGGCGGTCTCGCCAAGTCGCTGGATGCGGTGGTCGAGGATTGCGTGAACTCCGTGGGCGTGGACGTGAACACGGCCTCCGCCCCGCTGCTTGCCCGTGTGTCGGGCCTCAACCAGACGCTCGCCTCCAACATCGTTGCCTTCCGCGACGAGAACGGCGCCTTCAAGACGCGCACGGCGCTGAAGAAGGTGCCGCGGCTCGGGCCCAAGGCCTTCGAGCAGGCGGCCGGCTTCCTGCGCATCATGAACGGCAAGAACCCGCTCGATGGCTCGGCAGTGCACCCGGAGGCCTATCCGGTGGTGGAGAAAATCTCCGCGGCCACCAGCCGCCCCCTCAAGTCCATCATCGGCGATCGGGCGTTCCTGAAGTCGCTCAAGCCCGCCCAGTTCGCCGACGAAACCTTCGGCATTCCGACGGTCTCCGACATCATCGCCGAGCTGGAGAAGCCCGGGCGCGACCCGCGGCCCGAGTTCAAGACCGCCACCTTCACGGACGGTGTGGAAAAGATCGCCGACCTCGAGCCCGGCATGCAGCTCGAGGGTGTCGTGACGAACGTGGCGGCCTTCGGCGCATTCGTGGACATCGGTGTGCACCAGGACGGCCTCGTGCACATCTCGGAGCTGGCCGACCGCTTCGTGAAGGACCCGCGCGAGGTGGTCAAAGCCGGCGATGTAGTGAAGGTGCGCGTCAAGGAAGTGGATGCCGGCCGCAAGCGCATCGCGCTCACCATGCGGTCAGGTCCGATCGACCGCACGTCAGCGCCGAGCGACAGCAAAGCCCGCACATCAGCGCCGGCCTCGGGTGCTCGCAACAGTGCCCCCTCGCCGCAGGCCGCTCCGGCCGAGAGCGCGCTTGCGGCCGCTCTGCGCCGCGCGCAGGAACGCAAATAG
PROTEIN sequence
Length: 769
MNSINQRIATELGVGVAQVAAAVELLGEGATVPFIARYRKEKTGSLDDTQLRKLEERLGYLRELEDRRATVLKSIEEQGKLTADLARAVNAAETKVALEDLYAPYRPKRRTRAQIAREAGLEPLADALLANPTLDPQAEAAKFIAEDKGIANAKAALDGARHILVERMAEEPKLVGTLREWEWSEGVLTSKVLEGKKEEGAKFADYFDFGQSIKDIPSHRALAMLRGRNEGVLDLHIDVPHQVDRPHPAILKVMTAFNIAERGRPADAWLADTARLAWKGRMAASIGADLLTRLKERADAEAISVFSKNLKDLLLAAPAGPRVTMGLDPGFRTGVKVAVVDATGKLVDTDTIYPHEPKRDWRGALATLAALCMKHKVDLVSVGNGTASXXXXXXXXELIAKTPHLTLTKVMVSEAGASVYSASELAAKEFPDVDVSLRGAVSIARRLQDPLAELVKIEPKAIGVGQYQHDVDQGGLAKSLDAVVEDCVNSVGVDVNTASAPLLARVSGLNQTLASNIVAFRDENGAFKTRTALKKVPRLGPKAFEQAAGFLRIMNGKNPLDGSAVHPEAYPVVEKISAATSRPLKSIIGDRAFLKSLKPAQFADETFGIPTVSDIIAELEKPGRDPRPEFKTATFTDGVEKIADLEPGMQLEGVVTNVAAFGAFVDIGVHQDGLVHISELADRFVKDPREVVKAGDVVKVRVKEVDAGRKRIALTMRSGPIDRTSAPSDSKARTSAPASGARNSAPSPQAAPAESALAAALRRAQERK*