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SCNpilot_expt_1000_bf_scaffold_20832_curated_6

Organism: scnpilot_dereplicated_Alphaproteobacteria_8

near complete RP 41 / 55 BSCG 41 / 51 MC: 2 ASCG 7 / 38
Location: comp(2206..2745)

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L6 n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI0003748189 similarity UNIREF
DB: UNIREF100
  • Identity: 66.1
  • Coverage: 180.0
  • Bit_score: 245
  • Evalue 5.30e-62
50S ribosomal protein L6 {ECO:0000256|HAMAP-Rule:MF_01365, ECO:0000256|RuleBase:RU003870}; TaxID=1578971 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Filomicrobium.;" source="Filomicrobium sp. Y.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 63.7
  • Coverage: 179.0
  • Bit_score: 242
  • Evalue 4.80e-61
rplF; 50S ribosomal protein L6; K02933 large subunit ribosomal protein L6 similarity KEGG
DB: KEGG
  • Identity: 62.8
  • Coverage: 180.0
  • Bit_score: 238
  • Evalue 1.60e-60

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Taxonomy

No taxonomy information

Sequences

DNA sequence
Length: 540
ATGTCGCGCATCGGCAAGAAACCGGTCCCCATTCCCGCCAATGTGCAGGCGGAGGTGAATGGCCAGACCGTCAAGGTCAAGGGGCCGAAGGGCGAGCTCTCCGTGACGCTCCCCGAGGACGTCAAGGTCGAGAAGACCGCCGCCGGTGTCGCCGTGACGCCGCGCGAGGACACGCAGCGCGCACGCGCCATGTGGGGCCTCTCGCGTACGCTCGTCGACAACCAGGTCAAGGGTGTCGTCAACGGCTATGCCGAGACGCTCGAGATCCACGGCGTCGGCTTCCGCGCCCAGCTCAAGGGCAAGGATCTGACGCTGCAACTCGGGTTCAGCCACGAGATCAACTACAAGATCCCGGCCGACATCGATGTGAAGCTCGGCGGTCCGCGCCAGGATCACGTGCTGATCTCGGGGATCGACAAGCAGAAAGTCGGGCAGGTTGCAGCGGAGATCCGCGGCTTCCGTCCGCCGGAGCCGTACCAGGGCAAGGGTGTGCGCTATCAGGGCGAGTTCATCCTGCGCAAGGAAGGCAAGAAGAAGTAA
PROTEIN sequence
Length: 180
MSRIGKKPVPIPANVQAEVNGQTVKVKGPKGELSVTLPEDVKVEKTAAGVAVTPREDTQRARAMWGLSRTLVDNQVKGVVNGYAETLEIHGVGFRAQLKGKDLTLQLGFSHEINYKIPADIDVKLGGPRQDHVLISGIDKQKVGQVAAEIRGFRPPEPYQGKGVRYQGEFILRKEGKKK*