ggKbase home page

SCNpilot_expt_1000_bf_scaffold_20832_curated_10

Organism: scnpilot_dereplicated_Alphaproteobacteria_8

near complete RP 41 / 55 BSCG 41 / 51 MC: 2 ASCG 7 / 38
Location: comp(4302..4628)

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L24 n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI00037B243B similarity UNIREF
DB: UNIREF100
  • Identity: 79.6
  • Coverage: 108.0
  • Bit_score: 178
  • Evalue 2.80e-42
50S ribosomal protein L24 {ECO:0000256|HAMAP-Rule:MF_01326}; TaxID=1578971 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Filomicrobium.;" source="Filomicrobium sp. Y.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 83.3
  • Coverage: 108.0
  • Bit_score: 176
  • Evalue 1.50e-41
rplX; 50S ribosomal protein L24 similarity KEGG
DB: KEGG
  • Identity: 77.8
  • Coverage: 108.0
  • Bit_score: 171
  • Evalue 1.10e-40

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

No taxonomy information

Sequences

DNA sequence
Length: 327
ATGCCGTCACTCAAGATCAAAAAGGGTGACCACGTCATCGTGCTCGCGGGCCGCGACAAGGGCAAGCACGGCGAGGTCATCAAGGTGATCCCGAAGGAGAACCGCGCGCTGGTGCGTGGCGTGAACATGGTTCGCCGCCATCAGAAGCAAACTGCGGCTTCGGAAGGTGGGATCATCTCGAAGGAAGCAACGATCGATCTGTCGAACCTCGCGCTCGAGGATCCGAGGGACGGCAAGCCGACGCGCGTCGGTTTCAAGTTCCTCGAGGATGGCCGCAAGGTGCGGTTCTCGAAGCGTTCGGGCGAAGTCATTCCGGAGAAGTCATAA
PROTEIN sequence
Length: 109
MPSLKIKKGDHVIVLAGRDKGKHGEVIKVIPKENRALVRGVNMVRRHQKQTAASEGGIISKEATIDLSNLALEDPRDGKPTRVGFKFLEDGRKVRFSKRSGEVIPEKS*