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SCNpilot_expt_1000_bf_scaffold_5270_curated_3

Organism: scnpilot_dereplicated_Alphaproteobacteria_8

near complete RP 41 / 55 BSCG 41 / 51 MC: 2 ASCG 7 / 38
Location: comp(4175..5458)

Top 3 Functional Annotations

Value Algorithm Source
Tyrosine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02006, ECO:0000256|SAAS:SAAS00009759}; EC=6.1.1.1 {ECO:0000256|HAMAP-Rule:MF_02006, ECO:0000256|SAAS:SAAS00105716};; Tyrosyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02006}; TaxID=1029756 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium nitrativorans NL23.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 76.1
  • Coverage: 419.0
  • Bit_score: 649
  • Evalue 2.40e-183
tyrosyl-tRNA ligase (EC:6.1.1.1) similarity KEGG
DB: KEGG
  • Identity: 75.1
  • Coverage: 422.0
  • Bit_score: 644
  • Evalue 2.30e-182
tyrosyl-tRNA synthetase n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI00036ECCAE similarity UNIREF
DB: UNIREF100
  • Identity: 76.6
  • Coverage: 419.0
  • Bit_score: 656
  • Evalue 1.40e-185

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Taxonomy

Hyphomicrobium nitrativorans → Hyphomicrobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1284
GTGGATGCGACCGAAAGCCCGACGATCATGGCAAAGCACACATCCGATTTCCTCAACATACTGGCCGAGCGTGGCTTTATCCACCAGTGCTCGGACTTCGAGGGGCTCGATGCCCTCGCCGCCAAGGGCGAGATCGTGTCGTACGTCGGCTATGACTGCACGGCGCCCTCGCTGCACATCGGGCACCTGCTCTCCATCATGATGCTGCACTGGCTCCAGAAGAGCGGGGGCGGCCGACCCATCACGCTCATGGGCGGCGGCACGACGCGGGTCGGCGATCCCTCGGGCCGCGACGAGACGCGGCGCATTCTGCCCATCGAGCAGATCGAGGCGAACAAGGACAGCATCAAGAAGGTCTTCGCCAAGTTCCTCTCGTTCGGCGACGCACTCCACGATGCGGTGATGGCGGACAATGCCGAGTGGCTGGCGCCGCTGAACTACATCGAGTTCCTGCGCGATGTCGGCCGCCACTTCTCCGTGAACCGGATGCTGTCGATGGACTCGGCACGCATGCGCCTAGAGCGCGAGCAGGAGCTCTCTTTCATCGAGTTCAACTACATGCTGCTCCAGTCCTACGACTACGTGGAGCTCGCGCGGCGCTACAAATGCAATCTGCNNNNNNNNNNNNCCGATCAGTGGGGCAATATCGTCTCCGGCATCGATCTCGGCCGGCGTATGGGCACGCATCAGTTGTACGCACTCACCTGCCCGCTGCTGACGACCGCGTCCGGTGCGAAGATGGGCAAGACGGCCGCGGGCGCCGTCTGGCTCAACGAGGACCAGCTTCCGGTCTACGACTACTGGCAGATGTGGCGGAACACCGAGGATGCGGACGTCAGCCGCTTCCTGAAGCTCTTCACGCTGCTCCCGATGAGCGAGATCGCCAAGCTCTCAGGCCTCGGCGGCGCGGAGATCAACGAGGCGAAGAAGACGCTCGCCACAGAGGCAACCGCGCTCCTGCACGGGCGCGAGAAGGCCGAAGCCGCCGCCGAGACCGCGCGGCGCACGTTCGAGCAGGGCGAGACGGCCGAAGGCCTGCCGACCATCGAGGTGCCCATCGCGGATATCGAGAACGAGCTCGGCATTCTCGCAGCCTTCGTGACAGCCGGTCTCGTGAAGTCGAACAGCGAGGCGCGCCGTCAGATCCAGGCCGGCGGCCTGCGCGTGAACGATGCCGTGGTCAGCGACGAGAAGGCGAAGCTGCGCTCGGGTGATGTTTCCGCCGACGGCGTGATCAAGCTGAGCCTCGGCCGCAAAAAGCACGTGCTACTGCGGCCGGTATAG
PROTEIN sequence
Length: 428
VDATESPTIMAKHTSDFLNILAERGFIHQCSDFEGLDALAAKGEIVSYVGYDCTAPSLHIGHLLSIMMLHWLQKSGGGRPITLMGGGTTRVGDPSGRDETRRILPIEQIEANKDSIKKVFAKFLSFGDALHDAVMADNAEWLAPLNYIEFLRDVGRHFSVNRMLSMDSARMRLEREQELSFIEFNYMLLQSYDYVELARRYKCNLXXXXXDQWGNIVSGIDLGRRMGTHQLYALTCPLLTTASGAKMGKTAAGAVWLNEDQLPVYDYWQMWRNTEDADVSRFLKLFTLLPMSEIAKLSGLGGAEINEAKKTLATEATALLHGREKAEAAAETARRTFEQGETAEGLPTIEVPIADIENELGILAAFVTAGLVKSNSEARRQIQAGGLRVNDAVVSDEKAKLRSGDVSADGVIKLSLGRKKHVLLRPV*