ggKbase home page

SCNpilot_expt_1000_bf_scaffold_12436_curated_4

Organism: scnpilot_dereplicated_Alphaproteobacteria_8

near complete RP 41 / 55 BSCG 41 / 51 MC: 2 ASCG 7 / 38
Location: comp(1906..2874)

Top 3 Functional Annotations

Value Algorithm Source
Serine hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00051}; Short=SHMT {ECO:0000256|HAMAP-Rule:MF_00051};; Short=Serine methylase {ECO:0000256|HAMAP-Rule:MF_00051};; EC=2.1.2.1 {ECO:0000256|HAMAP-Rule:MF_00051};; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 79.9
  • Coverage: 323.0
  • Bit_score: 537
  • Evalue 1.30e-149
glyA; serine hydroxymethyltransferase; K00600 glycine hydroxymethyltransferase [EC:2.1.2.1] similarity KEGG
DB: KEGG
  • Identity: 79.2
  • Coverage: 322.0
  • Bit_score: 529
  • Evalue 8.00e-148
serine hydroxymethyltransferase n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0002FB0799 similarity UNIREF
DB: UNIREF100
  • Identity: 78.6
  • Coverage: 322.0
  • Bit_score: 531
  • Evalue 5.10e-148

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Devosia chinhatensis → Devosia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 969
ATGAACCAGGCCGTGTTCCTGGCGCTCCTGCAGCCGGGCGATACCTTCATGGGCCTCGACCTCAATGCCGGCGGACACCTCACGCACGGCTCGCCGGTCAACATGAGCGGCAAGTGGTTCAAGGTCGTGCCCTACGGCGTGCGCAAGGAAGACCAGCTCATCGACATGGACGAGGTCGAGCGCATCGCCAAGGCCAGCAAGCCCAAGCTGATCCTCGCCGGCGGCACGGCCTACTCGCGCTTCTGGGACTGGGCCCGTTTCCGTGCCATTGCCGACAGCGTCGGCGCCTACCTGATGGTCGACATGGCCCATATTGCCGGCCTCGTGGCTGGCGGCGTGCACCCCTCGCCCGTCCCGCACGCCCATGTCGTGACGACGACCACGCACAAGTCGCTCCGCGGCCCCCGCGGCGGCATCATCCTCAGCAATGACGAGGAGATCGCCAAGAAGATCAACTCGGCGGTCTTCCCGGGCCTGCAGGGCGGCCCGCTCATGCACATCATCGCGGCCAAGGCCGTGGCTTTCCACGAGGCCCTGCAGCCGTCGTTCAAGACCTACGCCAAGGCCGTCGTGGACAACGCGAAGGTGCTCGCCGAGACCATCAAGGCCGGCGGCTACGACATTGTCGCCGGCAGCACGGACAACCACCTCCTGCTCGTCGATCTGCGCCCGAAGAACCTCACCGGCAAGGCGTCCGAGATCGCGCTTGGGCGCGCCCACATCACGTGCAACAAGAATGGCGTGCCCTTCGATCCGCAGAAGCCGTTCGTAACGTCGGGCGTTCGCCTCGGCACGCCGGCCGGCACCACGCGCGGTTTCGGCGCAGGCGAGTTCCGCCAGATCGGCAAGATGATCGTCGAGGTGCTGGACGGCCTCGCCCGCAATGGCGATGCCGGTGATGCCCAGATCGAGCACCGCGTGCGCGAGGAAGCTATCGCGCTTTGCGACCGCTTCCCGATCTACGACTAG
PROTEIN sequence
Length: 323
MNQAVFLALLQPGDTFMGLDLNAGGHLTHGSPVNMSGKWFKVVPYGVRKEDQLIDMDEVERIAKASKPKLILAGGTAYSRFWDWARFRAIADSVGAYLMVDMAHIAGLVAGGVHPSPVPHAHVVTTTTHKSLRGPRGGIILSNDEEIAKKINSAVFPGLQGGPLMHIIAAKAVAFHEALQPSFKTYAKAVVDNAKVLAETIKAGGYDIVAGSTDNHLLLVDLRPKNLTGKASEIALGRAHITCNKNGVPFDPQKPFVTSGVRLGTPAGTTRGFGAGEFRQIGKMIVEVLDGLARNGDAGDAQIEHRVREEAIALCDRFPIYD*