ggKbase home page

SCNpilot_cont_1000_p_scaffold_3327_curated_3

Organism: scnpilot_dereplicated_Alphaproteobacteria_2

partial RP 38 / 55 BSCG 39 / 51 MC: 1 ASCG 10 / 38
Location: comp(1991..3733)

Top 3 Functional Annotations

Value Algorithm Source
Lytic transglycosylase catalytic n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HR07_PARL1 similarity UNIREF
DB: UNIREF100
  • Identity: 37.0
  • Coverage: 592.0
  • Bit_score: 336
  • Evalue 7.40e-89
lytic transglycosylase catalytic subunit similarity KEGG
DB: KEGG
  • Identity: 37.0
  • Coverage: 592.0
  • Bit_score: 336
  • Evalue 2.30e-89
Lytic transglycosylase catalytic {ECO:0000313|EMBL:ABS62340.1}; Flags: Precursor;; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 37.0
  • Coverage: 592.0
  • Bit_score: 336
  • Evalue 1.00e-88

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Parvibaculum lavamentivorans → Parvibaculum → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1743
GTGCTGGCCGCACTATGCGGCGGCGCCGTCGCAGAGACACCGCCGGCGACGCCCGCAGTCGCCGGTCCCGCCGCGCCACGTGTCCTGAGTCCCGATGACGTTGCCCTCTATCGCCAGGTGATGGCGGCCGAGCGGGCGGGCCAATATTCCCGCGCCCGAATCCTTTTTGCCAAGATCGGCGATCCCATCCTGCTGGGCTATGCCGAGGGATTGCATCTGCTCTCCGCCTCGCCCCGCAGCGTCAGAATCGGCGACCTCAAGGACTGGCTGAACGAATATCGCGACCTGGCGATCGCCGATCGCATCTATCGGTTGGCAGTTGCCCATTCCACCCGCAAGGTGCGCCGCCATCACAAGCTCATCACCGTGGCGGTGGTCACTAACATCCCTGCGCCCACAAGCGTGGGCAGCCGGTCCGGCGGCTATGAGGATGTGGAGTTGTCCGAGCCCTATCCCTCGGCGGAAGCAGGTCGCAGCGTGATGCCTGCCGTCCTGTCGGCCATCAAGGAGGGAAAACCCGACCAGGCGCTGGCGTTGATGCGCTCGGTGGAAGCCGCTGTCACGCCCACTGACCACGCCATCCTGGCCCATCGCATCGCTGCCTCTTACCGCGCGGAAAGCCGCGATGCCGACGCCTATGCGGTGGCCGTTTCGGTCTCGGATCCCGCCGTTCCGCAATTGATGTGGGATGCTGGGCTTGCCGCCTATCGTATTGGCCGCTGGAAGGACGCGGAGGAGCAGTTGGAAAAGCTGGCAGAGACGCCCGCTGCGCAGAACAGCCTGCGCGCCCAGGCCGCCTTCTGGGCCGCGCGGGCGCATATGCAGGAGGGCGATCCACAGAAGGTGGTGACACTGCTGGATTTCGCCGCCGGCAAGGAACCCAGTTTCTATGGCCTGATCGCCGAAAGTATCCTGGGCATCGATACCCAGACCGGCTTTGCCGATGCTGTCCTCAATGAGGCTGATTTCCGGGACCTTATGCACGATCCGGCGGCACGCCGCGCCGTGGCGCTATGGCAGATCGGCGAAAGCGACTATGTCGGACCCGAACTCAATCGCGCTTTCGTCAACAATGACGAGCGGCTCGATCCGGCGATGGCGGCGCTGGCCCGCGACATCGGCGTGGCCAATGTGGAACTGCGCGCGAGCGAGAAATGTGCCGCCCGTGGTATCATGCTGACGGGCCTGTTCCCCATGCCAGCCTACAATCCTGACGGCGGATACAAGATCGATTCGTCGCTGGTGCTGGCCTTCGCGCGCATTGAAAGCCGCTTTCAAACCCGGGCCACCTCGCCCGCCGGTGCACGCGGCCTGATGCAGCTCATGCCGGCCACCGCCAGGCATCTGGGCGTGGCCGACCCTGACACGCTTTATGATCCGGGAACTTCGCTGTCGGTGGGCCAGCGCTATATCGAGCGGTTGCTGAACCAGTTGGACGGCAACCTGCTGGAACTGGGCGGTGCCTATAATGCCGGGCCGCTGGCGGTGAACCGCTGGCTGGCAACCAAGGCGGGCGCCAATGACCCCCTGCTCTTCGTGGAAAGCATTCCGGTCTACGAGACGCGCTCCTATGTGAAGCGACTGATGCTCTATCACTGGCTCTATCGCCGCCGTTTCGGCCAGGAGGCCCGGAGCCTTGAGGAAACAGCCAGCGGCGCCTGGCCGATCTATCATCCGGCGCCGGGAATCTCAGCTTCGTCCAGCACCGCGCCGCTGCGTGTCAGCGCCGAAACGGGCCGCTGA
PROTEIN sequence
Length: 581
VLAALCGGAVAETPPATPAVAGPAAPRVLSPDDVALYRQVMAAERAGQYSRARILFAKIGDPILLGYAEGLHLLSASPRSVRIGDLKDWLNEYRDLAIADRIYRLAVAHSTRKVRRHHKLITVAVVTNIPAPTSVGSRSGGYEDVELSEPYPSAEAGRSVMPAVLSAIKEGKPDQALALMRSVEAAVTPTDHAILAHRIAASYRAESRDADAYAVAVSVSDPAVPQLMWDAGLAAYRIGRWKDAEEQLEKLAETPAAQNSLRAQAAFWAARAHMQEGDPQKVVTLLDFAAGKEPSFYGLIAESILGIDTQTGFADAVLNEADFRDLMHDPAARRAVALWQIGESDYVGPELNRAFVNNDERLDPAMAALARDIGVANVELRASEKCAARGIMLTGLFPMPAYNPDGGYKIDSSLVLAFARIESRFQTRATSPAGARGLMQLMPATARHLGVADPDTLYDPGTSLSVGQRYIERLLNQLDGNLLELGGAYNAGPLAVNRWLATKAGANDPLLFVESIPVYETRSYVKRLMLYHWLYRRRFGQEARSLEETASGAWPIYHPAPGISASSSTAPLRVSAETGR*