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SCNpilot_cont_500_bf_scaffold_33476_curated_4

Organism: scnpilot_dereplicated_Alphaproteobacteria_7

partial RP 26 / 55 BSCG 24 / 51 ASCG 3 / 38
Location: comp(2784..3287)

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter, permease protein n=1 Tax=Variovorax paradoxus B4 RepID=T1XAF0_VARPD similarity UNIREF
DB: UNIREF100
  • Identity: 61.7
  • Coverage: 167.0
  • Bit_score: 218
  • Evalue 3.80e-54
ABC transporter, permease protein similarity KEGG
DB: KEGG
  • Identity: 61.7
  • Coverage: 167.0
  • Bit_score: 218
  • Evalue 1.20e-54
ABC transporter, permease protein {ECO:0000313|EMBL:AGU49523.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus B4.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 61.7
  • Coverage: 167.0
  • Bit_score: 218
  • Evalue 5.40e-54

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 504
ATGATGCTCGCGCCGCCGGTCGAGGCGGTGCTGATGCCGGTCGCGATCGTCATCAACGCGGTCCCGTCCGTCGCCTTCGTGCCGCTTGTGCTGCTCTGGTTCGGCCTCGGCATGGCGTCCAAGATCGCGATCGGCGCGTTGGCCGTCGTCTTCGTCGTGCTGCTCAACCTGCTCGCCGGGCTGAAGCGTCCCGAGGTGGAGGCGATCAACCTGATGCGCTCCTTCGGCGCCGGCCCGCTCGGCATCCTGTTCCGCCTGCGCTTTCCGGCCGCCATGCCGCAGCTCGTCACCGGCCTTCGCGTCGGCCTCGCGCGCAGCACCATCGCCGTGATCGTCGCCGAGATGATGGGCGCCTATAGCGGCATCGGCCAGGTGATCTATCAGGCGACCGGACAGGTCGATTATCTTACGGTCTGGGCGGCGGTGTTCGTCGCCATGCTCGGCAGTCTCGCCCTCTATGGCGTGCTCGTCGCGATCGACCGCAAACTCGTATGGTGGAGATGA
PROTEIN sequence
Length: 168
MMLAPPVEAVLMPVAIVINAVPSVAFVPLVLLWFGLGMASKIAIGALAVVFVVLLNLLAGLKRPEVEAINLMRSFGAGPLGILFRLRFPAAMPQLVTGLRVGLARSTIAVIVAEMMGAYSGIGQVIYQATGQVDYLTVWAAVFVAMLGSLALYGVLVAIDRKLVWWR*