ggKbase home page

SCNpilot_cont_500_bf_scaffold_9404_curated_7

Organism: scnpilot_dereplicated_Alphaproteobacteria_7

partial RP 26 / 55 BSCG 24 / 51 ASCG 3 / 38
Location: 5978..6277

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Psychrobacter lutiphocae RepID=UPI00036D36F8 similarity UNIREF
DB: UNIREF100
  • Identity: 36.8
  • Coverage: 106.0
  • Bit_score: 67
  • Evalue 6.50e-09
Outer membrane auto transporter barrel {ECO:0000313|EMBL:EKG38487.1}; TaxID=1154762 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas syringae.;" source="Pseudomonas syringae pv. avellanae str. ISPaVe037.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 40.2
  • Coverage: 92.0
  • Bit_score: 67
  • Evalue 1.50e-08
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 55.2
  • Coverage: 58.0
  • Bit_score: 66
  • Evalue 5.90e-09

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pseudomonas syringae → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 300
ATGTCCGATCCGACCCAGCCTTATCCGCTTCCCGGCCAGCCGGGCGAGGGCGTGCCGCCCGGGCAGCCGATGCCGCCGATGCACGACCCGATCCCGTCGCCGGAGCCGACCCGCCAGCCGCCGGATATTCCGGGCAATGTGCCGCGCGAGTTGCCGCAGCAGGAGCCGCAGGAGCTGCCGCCCACCAATCCGAAGGGCGGCCCGACGCCCTATCCGGTGAACGATCCCGCGGTCGACGACCAGCCGGGGTCGGAGCCGGACTATGTGCCGCCGCTGCAACCTGAGCCGCCGGTGATGTAA
PROTEIN sequence
Length: 100
MSDPTQPYPLPGQPGEGVPPGQPMPPMHDPIPSPEPTRQPPDIPGNVPRELPQQEPQELPPTNPKGGPTPYPVNDPAVDDQPGSEPDYVPPLQPEPPVM*