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SCNpilot_cont_500_bf_scaffold_11179_curated_1

Organism: scnpilot_dereplicated_Alphaproteobacteria_7

partial RP 26 / 55 BSCG 24 / 51 ASCG 3 / 38
Location: 18..230

Top 3 Functional Annotations

Value Algorithm Source
cold-shock protein n=1 Tax=Kaistia granuli RepID=UPI00037EEA1D similarity UNIREF
DB: UNIREF100
  • Identity: 92.8
  • Coverage: 69.0
  • Bit_score: 134
  • Evalue 3.10e-29
cold-shock DNA-binding domain-containing protein; K03704 cold shock protein (beta-ribbon, CspA family) similarity KEGG
DB: KEGG
  • Identity: 82.4
  • Coverage: 68.0
  • Bit_score: 120
  • Evalue 1.90e-25
Cold-shock DNA-binding domain protein {ECO:0000313|EMBL:ADJ22679.1}; TaxID=582899 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB; 11706 / TK 0415).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 82.4
  • Coverage: 68.0
  • Bit_score: 120
  • Evalue 8.40e-25

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Taxonomy

Hyphomicrobium denitrificans → Hyphomicrobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 213
ATGCGCCAGACCGGCACCGTCAAGTTCTTCAATGCTTCCAAAGGCTTCGGCTTTATCACCCCCGACCAGGGCGGAGCCGACGTATTCGTTCACGTCACCGCGGTCGAGCGCTCCGGCCTCAGCGGCCTCAATGATGGCATGCGCATTTCCTTCGAGACCGAGCCGGACAAGCGCGGCAAGGGCCCGAAAGCGGTGGATCTCCGCCCGATCTGA
PROTEIN sequence
Length: 71
MRQTGTVKFFNASKGFGFITPDQGGADVFVHVTAVERSGLSGLNDGMRISFETEPDKRGKGPKAVDLRPI*