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SCNpilot_bf_inoc_scaffold_33935_curated_1

Organism: scnpilot_dereplicated_Bacteroidales_1

near complete RP 52 / 55 MC: 4 BSCG 51 / 51 MC: 2 ASCG 13 / 38
Location: comp(259..852)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma-70 factor n=4 Tax=Parabacteroides RepID=A7AL11_9PORP similarity UNIREF
DB: UNIREF100
  • Identity: 60.7
  • Coverage: 183.0
  • Bit_score: 233
  • Evalue 1.40e-58
RNA polymerase sigma-70 factor {ECO:0000313|EMBL:KKB52667.1}; TaxID=1078087 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. HGS0025.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 64.5
  • Coverage: 186.0
  • Bit_score: 242
  • Evalue 5.30e-61
RNA polymerase, sigma-24 subunit, ECF subfamily; K03088 RNA polymerase sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 48.9
  • Coverage: 180.0
  • Bit_score: 172
  • Evalue 1.50e-40

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Taxonomy

Parabacteroides sp. HGS0025 → Parabacteroides → Bacteroidales → Bacteroidia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 594
ATGCTAAAATTCTATTATTTTATGTACTTTTACCGCAGGAACATCATGGAGGCGCAGAACGACGACATACTATTATTGAAGCTGATTAAACAGGATGACCAATTGGCGTTCAAGCAGGTATTCTATAAATATATAGATCCATTAAGTCATTTTGTCAATTTCTATATTCACGACTGGGATGCAACGGAAGAGCTGGTCATGGATTTATTTTCCTTTATATGGGAGAACCGTACTACCCTCGAAATAAAGATTACCTTGAAAGCCTACCTTTTTCAGGCAGCTAAAAATAAAGCTTTCACACATATACGCGATAAAAAGGATACCGTAGCCATAGATGATGTGAGTGGCCAACTGTTCAGTACCGAAGATTGGCAGGTGGAATTTGATGAGTTGTCCCGGCTGGTTGAAGAAGCTGTATCTTTACTTCCCGAAAAATGCAGGGAGATTTTCAGCAGAAGCCGCGATAAAAACCTTACGAACCGCGAAATAGCCGAAGAGCTGGGTATTTCGGTTAAGACCGTTGAGGGACAGATTACCATTGCTCTTAAAAAAATCAAGGCTTTTCTGGGTGACAAATATGCTTACTTGTGGTAA
PROTEIN sequence
Length: 198
MLKFYYFMYFYRRNIMEAQNDDILLLKLIKQDDQLAFKQVFYKYIDPLSHFVNFYIHDWDATEELVMDLFSFIWENRTTLEIKITLKAYLFQAAKNKAFTHIRDKKDTVAIDDVSGQLFSTEDWQVEFDELSRLVEEAVSLLPEKCREIFSRSRDKNLTNREIAEELGISVKTVEGQITIALKKIKAFLGDKYAYLW*