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SCNpilot_bf_inoc_scaffold_552_curated_22

Organism: scnpilot_dereplicated_Bacteroidia_1

near complete RP 52 / 55 MC: 2 BSCG 50 / 51 ASCG 13 / 38
Location: 22254..23309

Top 3 Functional Annotations

Value Algorithm Source
Efflux transporter, RND family, MFP subunit n=1 Tax=Porphyromonas endodontalis ATCC 35406 RepID=C3J858_9PORP similarity UNIREF
DB: UNIREF100
  • Identity: 57.3
  • Coverage: 342.0
  • Bit_score: 386
  • Evalue 2.20e-104
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:EEN83523.1}; TaxID=553175 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas endodontalis ATCC 35406.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 57.3
  • Coverage: 342.0
  • Bit_score: 386
  • Evalue 3.10e-104
RND family efflux transporter MFP subunit similarity KEGG
DB: KEGG
  • Identity: 53.5
  • Coverage: 353.0
  • Bit_score: 383
  • Evalue 5.90e-104

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Taxonomy

Porphyromonas endodontalis → Porphyromonas → Bacteroidales → Bacteroidia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1056
ATGAAAATCAACAGGACTATTCTGTACACAACATGTTTCGCAACACTACTTTTTGGGGGGTGCAGCAAAAAAACAACTTCCGGCGACACGGAGGCAAACGCGCAAACAGCCGTAAAAGTAACCGTGAAGGACGCTGTGGAAATGGAATACACTCCCGTGTTAAATTTCACGGGAACAGCGGAACCGAATAAGGAAGTAAATCTGGGATCGGCAATTCCGGGACGTATAGAGAAAATTAATTACCCGAAAGGCAGTTTTGTGCCAAAAGGCGCCGTAATAGCCGAGATGTCTGACGAAATGCTTATCCAGGCAGAGATAGAATTAGAAACTATCCGTAAAGACTTCGAAAGGATCAGCCGTTTGAAAGAGAAAGGCAGTGTCAGTATAATGGATTACGACCATATAAAAGCCAAGTTTGAAGCTTCACAAACCAAAGTGGATATGTTGAAGAAAAACACTTCGATAACCGCCCCTTTCGGCGGGGTATTGGTGGATATTATGGTGAACGAAGGCGAGAACTACTCTTTTGTGCCTTCGGTAAGCCCCGACTTGAAAATGAAAAGCGGTATTGCGACGCTTATGCAGCTTAATCCGTTGAAAGTAAAAATAGAGATAAACGAGAAAGAGCTCAACGCCGTCCGCAAAGGGCAAAGCGTTGGGTTTACCTTTGATGCTTATCCCAACGAAAACGTTTCAGGAAAAATAGCCGATATTTCACCTGTGTTGTCGCCGCTTACCCGAACATTTACCGTAGAGGTGGTTATACCCAATAACGGAACCAAACTGAAACCCGGCATGTTTTGCCGCGCCTCCATCGAAATGCCCCCGGCTAAAGGGGTGTTCGTCCCCATCAACGCGATACACAGACAGCAAGGAACAGGTGACGATTTTGTATTTGTCGTAAATGAAGATAACACGGTTACCAGAACCAAAGTTACACGCGGCGAATCACAAAACAAACTTATCCGCATTCCCGAACTCGACAAAAACTCAGTTGTAGTTATCGACGGGAAAAACAAGCTGAATGACAATTCCAAAATAGAAATAGTGAAATAA
PROTEIN sequence
Length: 352
MKINRTILYTTCFATLLFGGCSKKTTSGDTEANAQTAVKVTVKDAVEMEYTPVLNFTGTAEPNKEVNLGSAIPGRIEKINYPKGSFVPKGAVIAEMSDEMLIQAEIELETIRKDFERISRLKEKGSVSIMDYDHIKAKFEASQTKVDMLKKNTSITAPFGGVLVDIMVNEGENYSFVPSVSPDLKMKSGIATLMQLNPLKVKIEINEKELNAVRKGQSVGFTFDAYPNENVSGKIADISPVLSPLTRTFTVEVVIPNNGTKLKPGMFCRASIEMPPAKGVFVPINAIHRQQGTGDDFVFVVNEDNTVTRTKVTRGESQNKLIRIPELDKNSVVVIDGKNKLNDNSKIEIVK*