ggKbase home page

SCNpilot_bf_inoc_scaffold_285_curated_27

Organism: scnpilot_dereplicated_Bacteroidia_1

near complete RP 52 / 55 MC: 2 BSCG 50 / 51 ASCG 13 / 38
Location: comp(33826..34395)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase ECF-type sigma factor id=1768552 bin=GWD2_Bacteroidales_45_23 species=Chryseobacterium gleum genus=Chryseobacterium taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWD2_Bacteroidales_45_23 organism_group=Bacteroidetes similarity UNIREF
DB: UNIREF100
  • Identity: 71.0
  • Coverage: 186.0
  • Bit_score: 277
  • Evalue 1.30e-71
sigma-W factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 51.6
  • Coverage: 186.0
  • Bit_score: 190
  • Evalue 6.70e-46
Tax=GWC2_Bacteroidetes_46_850_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 71.0
  • Coverage: 186.0
  • Bit_score: 277
  • Evalue 1.90e-71

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

GWC2_Bacteroidetes_46_850_curated → Bacteroidia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 570
ATGATAAGAGAAGAAAACAGAGAGCAGGCCCTTCTTCAGCAAATTGTGCGCGGTAACACCATTGCCATGAAGGAGTTTTACGACATGTATTCGGGGTATCTTACCGCGGTATGCTCTCGTTACATATCTAATCAGGAGGATGTTAAGGATGTTCTACAGGAAAGTTTCATTAAAATATTCAAGGCTGTTGACCGGTTCGAATATAAGGGAGCGGGATCGTTAAAAGCGTGGTCGTCCCGCATTGTAGTAAATGAAGCGTTGAAACACATCAGGGAGAGCAATAAACTGAATATCACGAATCTGCCAAGCTGGGATTTGCCCGACATGGCCGACGACCGGGCGCCCGATTTCAATGATGTACCTACATCGGTTATCCTGGAAATGATTCGTAAACTCCCTTTGGGTTACCGGACCGTGTTCAACCTGTATGTTTTCGAGGAAAAAAGTCATAAAGAGATCGCTTCGATATTGGATATTGCGGAAAACACTTCGGCGTCGCAGTTACACAGGGCCAAAGGGCTGTTGATGCGGGAAATAGATTTGTATCGATTAAAAAAAATGGCACTATGA
PROTEIN sequence
Length: 190
MIREENREQALLQQIVRGNTIAMKEFYDMYSGYLTAVCSRYISNQEDVKDVLQESFIKIFKAVDRFEYKGAGSLKAWSSRIVVNEALKHIRESNKLNITNLPSWDLPDMADDRAPDFNDVPTSVILEMIRKLPLGYRTVFNLYVFEEKSHKEIASILDIAENTSASQLHRAKGLLMREIDLYRLKKMAL*