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SCNpilot_bf_inoc_scaffold_1659_curated_6

Organism: scnpilot_dereplicated_Bacteroidia_2

near complete RP 52 / 55 MC: 5 BSCG 50 / 51 MC: 5 ASCG 12 / 38 MC: 4
Location: 7111..7350

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L28 n=8 Tax=Parabacteroides RepID=A7AEM9_9PORP similarity UNIREF
DB: UNIREF100
  • Identity: 97.5
  • Coverage: 79.0
  • Bit_score: 160
  • Evalue 7.70e-37
50S ribosomal protein L28 {ECO:0000256|HAMAP-Rule:MF_00373}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 97.5
  • Coverage: 79.0
  • Bit_score: 160
  • Evalue 1.10e-36
rpmB; 50S ribosomal protein L28; K02902 large subunit ribosomal protein L28 similarity KEGG
DB: KEGG
  • Identity: 93.7
  • Coverage: 79.0
  • Bit_score: 155
  • Evalue 1.00e-35

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Taxonomy

Parabacteroides merdae → Parabacteroides → Bacteroidales → Bacteroidia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 240
ATGTCTAAGATTTGTCAAATTACCGGAAAAAAAGCAATGGTTGGCAACAACGTTTCGCACTCTAAAAGGAGAACGAAGCGTAAGTTTGATGTTAACCTGTTCACAAAAAAGTTCTACTGGGTAGAGCAAGATTGTTGGGTTAGCCTGAATATTTCAGCCGCAGGCTTGCGTACTATCAATAAGATAGGATTGGATGAAGCAATTAAAAAAGCTGCTGAAAAAGGTTATTTAAACGCTTAA
PROTEIN sequence
Length: 80
MSKICQITGKKAMVGNNVSHSKRRTKRKFDVNLFTKKFYWVEQDCWVSLNISAAGLRTINKIGLDEAIKKAAEKGYLNA*