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SCNpilot_bf_inoc_scaffold_184_curated_28

Organism: scnpilot_dereplicated_Bacteroidia_2

near complete RP 52 / 55 MC: 5 BSCG 50 / 51 MC: 5 ASCG 12 / 38 MC: 4
Location: 38788..39462

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Fibrella aestuarina BUZ 2 RepID=I0K8B4_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 27.2
  • Coverage: 169.0
  • Bit_score: 67
  • Evalue 1.50e-08
RNA polymerase, sigma-24 subunit, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 27.2
  • Coverage: 169.0
  • Bit_score: 67
  • Evalue 4.60e-09
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:CCH00367.1}; TaxID=1166018 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrella.;" source="Fibrella aestuarina BUZ 2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 27.2
  • Coverage: 169.0
  • Bit_score: 67
  • Evalue 2.00e-08

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Taxonomy

Fibrella aestuarina → Fibrella → Cytophagales → Cytophagia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 675
ATGGCTCAGGAACAATTCGACGATATTGATCATCTTATCTATTTGATTGCCGGAAGTACGGTTATCCAGACTAAGAAACTGGCGGCTTTTGAAAAACTGTACCTGTTGTTTTGGCAGCCCCTGAAAAGTTTCGCTCTTAAAAATAATGCCGGAGCGATGGAGGCTGAAGATATTGTACAGGAGTTATTCGCCGATTTATGGCAATGCCGGGATGAGCTTTTTCCCGTTGAAATTCAAAACAGGGAGCAATTGGTCAAATGGTTGCTCTCGAAACTTCGGGGTCGGGTATCCAACTTCAAAAAAAGGAAATCCCGGACAGTCGATTTCGAAGACAAGAACTACAGCGGGGAGATCCAGTTGAATGCCGTTGATGACGACGGGCCGCAAGAGGAGCTGGAAAGAAAGGAATTCGACGAAAAGATGGAAGAGGTCATCAACGGCCTGCCGCGTGAGATGAGGATTGTCTATAACCATAAGGTAAAGAAAGGATATAACCTGCAGCAGATCGCTTCGGAAATGGGCGTAACCATTACGCAGGTACGCGAGTATTTTGACAAGGCGAAAACCGTTATCGAGGAGAAAATGATGCTGACTTACCTTGTCCGGCGTTTTATTTCGGATTCATTGCCAAAACCGGATGAGAATGAAGAGTGGGACCCGTTATCCCGGAAGTGA
PROTEIN sequence
Length: 225
MAQEQFDDIDHLIYLIAGSTVIQTKKLAAFEKLYLLFWQPLKSFALKNNAGAMEAEDIVQELFADLWQCRDELFPVEIQNREQLVKWLLSKLRGRVSNFKKRKSRTVDFEDKNYSGEIQLNAVDDDGPQEELERKEFDEKMEEVINGLPREMRIVYNHKVKKGYNLQQIASEMGVTITQVREYFDKAKTVIEEKMMLTYLVRRFISDSLPKPDENEEWDPLSRK*