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SCNpilot_expt_1000_bf_scaffold_280_curated_15

Organism: scnpilot_dereplicated_Bosea_1

near complete RP 50 / 55 MC: 1 BSCG 49 / 51 MC: 4 ASCG 11 / 38
Location: comp(15076..15633)

Top 3 Functional Annotations

Value Algorithm Source
dTDP-4-dehydrorhamnose 3,5-epimerase (EC:5.1.3.13); K01790 dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] similarity KEGG
DB: KEGG
  • Identity: 64.2
  • Coverage: 179.0
  • Bit_score: 244
  • Evalue 3.00e-62
dTDP-4-dehydrorhamnose 3,5-epimerase n=1 Tax=Methylocystis parvus RepID=UPI0002DB012A similarity UNIREF
DB: UNIREF100
  • Identity: 73.9
  • Coverage: 180.0
  • Bit_score: 280
  • Evalue 1.50e-72
dTDP-4-dehydrorhamnose 3,5-epimerase {ECO:0000313|EMBL:EIM26167.1}; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 68.6
  • Coverage: 185.0
  • Bit_score: 257
  • Evalue 1.50e-65

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Taxonomy

Microvirga lotononidis → Microvirga → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 558
ATGCTCAGCGTCGAAGAGACTGCGATCCCGGCGGTCAAGATCATCACTCCGAAAAGGCACGGCGACCACCGCGGCTTCTTCTCGGAGGTCTACAAGCAATCGGACATGGCGGAGGCGGGCATCGATCTGGTCTTCGTGCAGGACAATCACTCGCTGTCGGCCCAGGTCGGTACCTTGCGGGGCCTGCATTTCCAGTCGGCGCCCTTTGCCCAGGACAAGCTGGTGCGGGTCGCCCGTGGCCGCATTCTGGATGTCGCCGTCGATATCCGGACTTCGTCGCCGACGTTCGGCCGGCATGTCGCCGTCGAGCTCTCCGCCGAGAACTGGAAGCAATTGCTGGTGCCGATCGGCTTCGCCCACGGCTTCGTCACGCTGGAGCCGGATACCGAGGTGCTCTACAAGGTGACGGCTCCCTACGGACCGGACAACGACCATGGGCTTGCCTTCGACGATCCGGCGCTCGGCATCGACTGGGGCCTTCCAGCCGACAGGCTCGTTCTCTCCGAGAAGGACCGCAAGCATCCGCGCCTGGCCGAGATGCTGCGGTATTTCGACTGA
PROTEIN sequence
Length: 186
MLSVEETAIPAVKIITPKRHGDHRGFFSEVYKQSDMAEAGIDLVFVQDNHSLSAQVGTLRGLHFQSAPFAQDKLVRVARGRILDVAVDIRTSSPTFGRHVAVELSAENWKQLLVPIGFAHGFVTLEPDTEVLYKVTAPYGPDNDHGLAFDDPALGIDWGLPADRLVLSEKDRKHPRLAEMLRYFD*