ggKbase home page

scnpilot_p_inoc_scaffold_1532_curated_35

Organism: scnpilot_dereplicated_Burkholderiales_1

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 14 / 38
Location: 35975..36910

Top 3 Functional Annotations

Value Algorithm Source
Collagen triple helix repeat-containing protein n=1 Tax=Acidovorax radicis RepID=UPI00023774A0 similarity UNIREF
DB: UNIREF100
  • Identity: 55.1
  • Coverage: 321.0
  • Bit_score: 312
  • Evalue 6.10e-82
collagen triple helix repeat-containing protein similarity KEGG
DB: KEGG
  • Identity: 51.7
  • Coverage: 329.0
  • Bit_score: 282
  • Evalue 1.30e-73
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 88.2
  • Coverage: 313.0
  • Bit_score: 566
  • Evalue 2.50e-158

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RLO_Burkholderiales_64_33 → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 936
ATGAAGTCATCTTTTCATCCTCTGCGTCTGATCTGCGCCCTGAGCGCTGTCTATGCACTGCACACGCCCCTGGCCCTGGCTGCAGATCTCAGCTTCACCCCGCCCAGCGGCGGCGGTTTTGTGATCAAGAGCCCGGGCGGTGCCCAGGAACGGTTTCGTGTGCAGGGCACTGGCGAGGTCACTGTCCCCGGCCTGAACGGTGCCCCCACCGCCAACAACCTCACCTGCTTTGATGGCGCAGGGCGCCTGGGGCCTTGTGCGGCAGGTATTGGCTCTGGCGCCACGGGTGCCACAGGCCCCACCGGGGCGACCGGTGCAACAGGCGTGACCGGCCCCACCGGTGTCACAGGTACCACAGGTACTACCGGTGTTACTGGCGCCACTGGTCCGACAGGTGCCACTGGAGCGACCGGCGCTTCGGGCACCGGTGCCACGGGCGCAACAGGCGCCACCGGGGCCACGGGCGCTACCGGTGTGACGGGCCCCACGGGGGTCACGGGTGCAACGGGCGCCACGGGTGCAGACAGCACCGTACAAGGACCTACAGGCCCTACGGGGGCTCAAGGCCTCCAGGGCATTCCTGGGCCTACCGGCGCTACCGGTGCCGACAGTACCGTGCCCGGGCCAACCGGGACCACCGGCGCAACGGGTGCCACAGGGCCAACCGGCGCTACGGGCGCCACAGGGGTTGCTGGACCATTGACGCTGACCACGGTCACCAACAATGACTCATGGGCCGCAAATGCTGGTGCAGTCTCGGTGACTGCAACGTGCACGGCAGGAAAAACGGTGGTCAGTGGAGGATGTCGTATGACATTAAACGCCGCTGACCACTACTTTGGAGGGGGCTACCCAGCTGCAGCCGACCAATGGACCTGTGAGTACAGTGTTTTCGGGAATACGGCTGCAGCCACGGCCTACGCCATCTGCCAGTAG
PROTEIN sequence
Length: 312
MKSSFHPLRLICALSAVYALHTPLALAADLSFTPPSGGGFVIKSPGGAQERFRVQGTGEVTVPGLNGAPTANNLTCFDGAGRLGPCAAGIGSGATGATGPTGATGATGVTGPTGVTGTTGTTGVTGATGPTGATGATGASGTGATGATGATGATGATGVTGPTGVTGATGATGADSTVQGPTGPTGAQGLQGIPGPTGATGADSTVPGPTGTTGATGATGPTGATGATGVAGPLTLTTVTNNDSWAANAGAVSVTATCTAGKTVVSGGCRMTLNAADHYFGGGYPAAADQWTCEYSVFGNTAAATAYAICQ*