ggKbase home page

scnpilot_p_inoc_scaffold_1000_curated_10

Organism: scnpilot_dereplicated_Burkholderiales_8

near complete RP 51 / 55 MC: 1 BSCG 50 / 51 MC: 2 ASCG 13 / 38 MC: 1
Location: comp(7352..9367)

Top 3 Functional Annotations

Value Algorithm Source
Conjugal transfer coupling protein TraG n=1 Tax=Cupriavidus sp. HMR-1 RepID=L2ELN6_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 94.1
  • Coverage: 676.0
  • Bit_score: 1283
  • Evalue 0.0
Type IV secretory system Conjugative DNA transfer family protein {ECO:0000313|EMBL:AIO48269.1}; TaxID=292 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia cepacia (Pseudomonas cepacia).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 94.1
  • Coverage: 676.0
  • Bit_score: 1283
  • Evalue 0.0
conjugal transfer coupling protein TraG; K03205 type IV secretion system protein VirD4 similarity KEGG
DB: KEGG
  • Identity: 93.0
  • Coverage: 676.0
  • Bit_score: 1267
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Burkholderia cepacia → Burkholderia → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2016
ATGATGCAGGGAACGAACGTGCTGTTCGGTCAGATTGTCGTGGTGCTCGGCATCGTGACCGCCGGAGTGTGGAGCGCCACGCAATGGACAGCCGCTGCACTGGGCTACCAGCTACGCCTGGGCTCGCCGTGGTTCGATTTCCTCGGCACGCCGATCTATCGCCCGTGGCAGCTGTTCGAGTGGTGGTTCTTCTTCGACGCCTACGCGCCGCGCGTCTTCGATGTGGGCGGGGCCATTGCGGCGGGCAGTGGCCTGATCGCGGTGCTGGTCGCCATCGGCATGTCGATCTGGCGCTCGCGCCAGTCCAAGCTGGTCACGACCTACGGCTCGGCACGCTGGGCCAATGCGGAGGACATCCACAAGGCGGGCCTTGACCAGCCTGCGGGTGTGTTCCTGGGCTTGCATCGCCAGCAGTACCTGCGCCACGAAGGCCCGGAACACGTCCTGACTTTCGCGCCCACGCGCTCGGGCAAGGGCGTGGGCCTGGTGGTGCCGACGCTGCTGTCCTGGCCCGCGTCCGCCGTCATCCATGACATCAAAGGCGAGAACTGGCAGATCACCGCCGGCTGGCGCTCGCGCTTCTCACACTGCCTGCTGTTCAACCCCACCGATGCGAACTCTGCCGCCTACAACCCGCTTCTGGAGGTGAGGCGCGGCGCGCATGAAGTGCGCGACGTACAGAACATCGCGGACATCCTCGTCGATCCCGAAGGTGCGCTGGAGCGGCGCAACCACTGGGAGAAGACTTCGCACGCGCTGCTGGTCGGCGCCATCCTGCATGTGCTCTACGCGGGCGAAGACAAGACGCTGCGCGGCGTGGCGAACTTCCTCAGCGACCCGGCCTGTCCATTCGAGCTGACGCTGCACCGGATGATGACCACGCCGCACCTCGTGAACGAGGAAGGAGGTGGCCCGCATCCGGTGGTGGCCTCGGCTGCACGGGAAGTCCTCAACAAGAGCGACAACGAACGTTCGGGCGTGCTGTCCACAGCCATGTCGTTCCTCGGCCTCTACCGCGACCCTACGGTGGCCGAAGTCACGTCGCGCTGCGACTGGCGCATCGCCGACCTGATCGCCGCCGAGCACCCGGTCTCTCTGTATCTCGTGGTGCCGCCTTCAGACATCAGCCGCACCAAGCCTCTGATCCGCCTGATCCTCAACCAGATCGGCCGGCGGCTGACCGAATCGCTCGATGGCTCCGACGGCATCGCCCGCCGCCACAAGCTGCTGTTGATGCTCGATGAGTTCCCGGCACTCGGGCGGCTCGACTTCTTCGAGACGGCCTTGGCCTTCATGGCGGGCTATGGCATCCGCAGCTTCCTGATCGCGCAGAGCCTGAACCAGATCGACAAGGCTTACGGCCAGAACCATTCGATCCTCGACAACTGCCATGTCCGGGTGACGTTCGCCACCAACGACGAGCGCACCGCCAAACGGATCTCCGAGACGCTCGGCACCGCGACCGAGCTGCGCGCGCAGCGCAACTATGCGGGCCACCGCCTCGCTCCGTGGCTCGGGCACCTCATGGTGTCCCGCCAGGAAACCGCCCGCCCGCTGTTGACACCGGGCGAGGTAATGCAGCTACCGCCCGATGAGGCGGTAGTGATGGTCTCCAGCGTGGCACCGATCAAGGCCAAGAAGCTGCGCTACTACGCGGACAGCAATTTCAAGCGGCGCGTGCTATCGCCGCCCGTGCTCGCGGCCGGGCGCTATGCCGACGTGCCGCCATCGCGACCCGACGACTGGAGCGGGCTGGCGGTTCCCACCGTGCCTGTCGCTCCGACCACTGCGTCCGCTGATGGCCTGGGCAGCGCCGCCGACGACGGTGGCCCGCGCCGCCAGCCCGAACTCTCCGAAACCGTCGCCTACGACCCCGACCTGGTTGCGCCCACAGCCGACCTCGGGTTGCTCGATGACGACGACATACCGCTTCCCCTTCCGCGCCAGCTCGATCCGGCCCTGCAGCGCACGGCCCGGCTGGCATCCCTTGACCCTAACGACGGGATCGACCTATGA
PROTEIN sequence
Length: 672
MMQGTNVLFGQIVVVLGIVTAGVWSATQWTAAALGYQLRLGSPWFDFLGTPIYRPWQLFEWWFFFDAYAPRVFDVGGAIAAGSGLIAVLVAIGMSIWRSRQSKLVTTYGSARWANAEDIHKAGLDQPAGVFLGLHRQQYLRHEGPEHVLTFAPTRSGKGVGLVVPTLLSWPASAVIHDIKGENWQITAGWRSRFSHCLLFNPTDANSAAYNPLLEVRRGAHEVRDVQNIADILVDPEGALERRNHWEKTSHALLVGAILHVLYAGEDKTLRGVANFLSDPACPFELTLHRMMTTPHLVNEEGGGPHPVVASAAREVLNKSDNERSGVLSTAMSFLGLYRDPTVAEVTSRCDWRIADLIAAEHPVSLYLVVPPSDISRTKPLIRLILNQIGRRLTESLDGSDGIARRHKLLLMLDEFPALGRLDFFETALAFMAGYGIRSFLIAQSLNQIDKAYGQNHSILDNCHVRVTFATNDERTAKRISETLGTATELRAQRNYAGHRLAPWLGHLMVSRQETARPLLTPGEVMQLPPDEAVVMVSSVAPIKAKKLRYYADSNFKRRVLSPPVLAAGRYADVPPSRPDDWSGLAVPTVPVAPTTASADGLGSAADDGGPRRQPELSETVAYDPDLVAPTADLGLLDDDDIPLPLPRQLDPALQRTARLASLDPNDGIDL*