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SCNpilot_bf_inoc_scaffold_535_curated_54

Organism: scnpilot_dereplicated_Burkholderiales_2

near complete RP 53 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: comp(55558..55980)

Top 3 Functional Annotations

Value Algorithm Source
Putative lipoprotein transmembrane n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5CQE2_VARPS similarity UNIREF
DB: UNIREF100
  • Identity: 51.1
  • Coverage: 131.0
  • Bit_score: 134
  • Evalue 7.90e-29
lipoprotein transmembrane similarity KEGG
DB: KEGG
  • Identity: 51.1
  • Coverage: 131.0
  • Bit_score: 134
  • Evalue 2.50e-29
Putative lipoprotein transmembrane {ECO:0000313|EMBL:ACS21714.1}; Flags: Precursor;; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain S110).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 51.1
  • Coverage: 131.0
  • Bit_score: 134
  • Evalue 1.10e-28

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 423
GTGGCCCCCGGCAGCCCGGCCACCGAGCTGGCGCAACGGCTCGGCCCGCCCACCGCCCGCTACCCGGCCACGGCCGACGCGGGGGAGCGCTGGCAGTATTCCCACCAGCCGGCCGGTCAGCAGGTGTTCAACCTCGACCTGGACGCCCAGGGCCGCGTGGCGCGCGTCGAGCAGGCGCTGAGCGAGGGGCTGTTCGGTGCCCGCATCCGGCCCGGGCGCTGGACGCGCGACGACGTGCTGCGCGAATACGGCCGGCCTGCGCGGGTGACCCGCGTGCACAACTTCGACGGCGACATCTGGGTCTGGCGCTACCTGGACGGCCCCACCTGGCGCCTGCTGTACATCGACATCGACCGCGCCGGCGTGGTGCGCGGCTGGTCCAGCGGCGACGAAAACCTGCCCGACCCGCCGGAGCCCAGGTGA
PROTEIN sequence
Length: 141
VAPGSPATELAQRLGPPTARYPATADAGERWQYSHQPAGQQVFNLDLDAQGRVARVEQALSEGLFGARIRPGRWTRDDVLREYGRPARVTRVHNFDGDIWVWRYLDGPTWRLLYIDIDRAGVVRGWSSGDENLPDPPEPR*