ggKbase home page

SCNpilot_expt_1000_bf_scaffold_1247_curated_17

Organism: scnpilot_dereplicated_Burkholderiales_4

near complete RP 52 / 55 MC: 2 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 15930..16712

Top 3 Functional Annotations

Value Algorithm Source
Exodeoxyribonuclease III {ECO:0000313|EMBL:AHV93312.1}; EC=3.1.11.2 {ECO:0000313|EMBL:AHV93312.1};; TaxID=1247649 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella holmesii ATCC 51541.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 78.8
  • Coverage: 260.0
  • Bit_score: 442
  • Evalue 3.50e-121
crc; catabolite repression control protein; K01142 exodeoxyribonuclease III [EC:3.1.11.2] similarity KEGG
DB: KEGG
  • Identity: 77.7
  • Coverage: 260.0
  • Bit_score: 438
  • Evalue 1.50e-120
Catabolite repression control protein n=3 Tax=Bordetella holmesii RepID=M5NJ99_9BORD similarity UNIREF
DB: UNIREF100
  • Identity: 78.8
  • Coverage: 260.0
  • Bit_score: 442
  • Evalue 2.50e-121

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Bordetella holmesii → Bordetella → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 783
ATGCTCAGAATCGTCTCCCTCAATCTCAACGGCATCCGGTCCGCCGCATCGAAGGGCTTCTTCGACTGGATGGCGCAGCAGCGCGCCGACTTCGTGTGCGTGCAGGAGCTCAAGGCCCAGGAGGCCGACATGACGCCGGTCATGCTGGCGCCCCCGGGCTTGCACGGCTACTTCCACTATGCGCAGAAGAAGGGCTACAGCGGCGTCGGCATCTATGCCCGCGAGGAGCCGAGGGAGGTCGTCGTCGGGCTCGGCGTTCCGGAGATCGACTGCGAGGGTCGCTACGTCGAGCTGCTCTACGACGGGCTGTCCGTGGTGTCGCTCTACCTGCCCTCGGGGTCCAGCGGAGAGCACCGGCAGGCCGCCAAGTACGAGTTCATGGACCACTTCTTCAGGCACCTCGCCGATCTCGTCGCCAGGGGGCGGGAGATCGTGATCTGCGGCGACTGGAACATCGCGCACAGGGAGGCCGACCTGAAGAACTGGAAGGGCAACCTCAAGAATTCGGGCTTCCTGCCCGAGGAGCGTGCATGGCTCTCGCGGGTGTTCGACGAGCTGGGATGGGTGGACACCTACCGGCGGCTCGAGCCCGACGCGACCGATGCCGCCTACACGTGGTGGAGCAATCGTGGCCAGGCCTGGGCGAAGAACGTCGGATGGCGGATCGACTACCAGATCGCGACCACCGGCCTTGCCGGGACCGCTCGGTCCGCCTCGATCTACAAGGATCACCGCTTCAGCGATCACGCGCCGCTGACCATCGAGTACGCCGCCTCCCTGTGA
PROTEIN sequence
Length: 261
MLRIVSLNLNGIRSAASKGFFDWMAQQRADFVCVQELKAQEADMTPVMLAPPGLHGYFHYAQKKGYSGVGIYAREEPREVVVGLGVPEIDCEGRYVELLYDGLSVVSLYLPSGSSGEHRQAAKYEFMDHFFRHLADLVARGREIVICGDWNIAHREADLKNWKGNLKNSGFLPEERAWLSRVFDELGWVDTYRRLEPDATDAAYTWWSNRGQAWAKNVGWRIDYQIATTGLAGTARSASIYKDHRFSDHAPLTIEYAASL*