ggKbase home page

SCNpilot_expt_1000_bf_scaffold_1133_curated_3

Organism: scnpilot_dereplicated_Burkholderiales_4

near complete RP 52 / 55 MC: 2 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(1986..3293)

Top 3 Functional Annotations

Value Algorithm Source
C4-dicarboxylate TRAP-T family tripartite ATP-independent periplasmic transporter, membrane protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MKG2_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 70.4
  • Coverage: 432.0
  • Bit_score: 606
  • Evalue 1.70e-170
C4-dicarboxylate TRAP-T family tripartite ATP-independent periplasmic transporter, membrane protein {ECO:0000313|EMBL:EIK89702.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 70.4
  • Coverage: 432.0
  • Bit_score: 606
  • Evalue 2.40e-170
TRAP dicarboxylate transporter subunit DctM similarity KEGG
DB: KEGG
  • Identity: 43.7
  • Coverage: 421.0
  • Bit_score: 370
  • Evalue 6.40e-100

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Hydrogenophaga sp. PBC → Hydrogenophaga → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1308
ATGCTGCAGCAGCTCCTGCCCTTCTGCATCCTGATGGGGGCGTTCCTGGCGCTGCTGGCGCTGGGGGTGCCGGTGTTCTTCGCGATGGGGCTGGCGTCGCTGTCGTTCATCCTGGCGATGGGCGGGCAGGTGCCGTTCAACGTCCTGGCCTCGACGCTGATCCAGGGCATCGACTCGTTCGCCTTCCTGGCGATCCCCTTCTTCTTCCTTGCCGGCGAGCTGATGAACACCGGCGGCATCACGCGGCGGCTGCTCGCCTTCGCCGCGGCGCTGGTCGGCCACATTCGCGGCGGGCTGTCGCATGTCGCGATCATCGCGAGCATGGTGTTCTCCGGAGTGTCCGGCTCGGCCGTCGCCGATGCGTCGGCGATCGGCGGCGCGCTGATCCCGGCGATGAAGGCCCAGAAGTATCCGGCCGAGTACGCGGCCGCGGTGGTCGCGGCGGCCTCCACGATGGGGCCGGTGATCCCGCCGTCGATCGCCTTCGTGGTCTACGCGCTGGTCACCGAGACCTCGGTGGGCGAGCTGTTCCTCGCCGGCGCGATCCCCGGCGTGCTGATGGGCGTGTGGCTGCTGGCGGCCGCGAGCGTGATCGCGCGGCGCCGCGATTTCCCGTTCTCCCCGCGGGCCACCATCGCACGCGTGTTCTCCACGCTGCGCGATGCGATCTTCGCGCTGATGATGCCGGTGATCATCCTCGGCGGCATCGTCGCCGGCGTGGTGACGCCGACCGAGGCCGGCGTGATCGCGGTCGTCTATGCCGCCGTGGTCGGGCTGTTCGTGTATCGGGAAATGCGGCTGGCGGACCTGTGGCGGGTGGTGTGCGAATCGACGATCAGCTCGGGGCTGATCCTGCTGATGGTCGCGGCTTCGGGCACGTTCTCGTGGCTGGTCGCCAACATGGCGATCGGCGACACGCTGGTGACGTTCTTCACCTCGCTCACCGACAGCCGCTGGGTGATGCTGATGGTCATCAACGTCTTCTTCCTGATCTGGGGGCTGGCGCTCGAGCCGCCGGTGGCGCTGGTCACCATGGTGCCGCTGCTGGTGCCGCTGGCCAACGCCTACCACATCGATCTCATCCACCTCGGGGTGGTGGTCGTGCTCAACCTGATGATCGGGCAGCTGACGCCGCCCTCCGGCGTGGTCACCTTCCTGACGGCGCAGATCGCCGGCGCGCCGCTCGCGGCGGTCTTCCGCGAGGCGACGCCGTTCATGCTCGCGCTGATCGTGCTGCTGCTGCTGATCACCTACGTGCCGGCCATCGCGTTGTGGCTGCCCGCCCTGTTGATGGGCGGCCACGGTTGA
PROTEIN sequence
Length: 436
MLQQLLPFCILMGAFLALLALGVPVFFAMGLASLSFILAMGGQVPFNVLASTLIQGIDSFAFLAIPFFFLAGELMNTGGITRRLLAFAAALVGHIRGGLSHVAIIASMVFSGVSGSAVADASAIGGALIPAMKAQKYPAEYAAAVVAAASTMGPVIPPSIAFVVYALVTETSVGELFLAGAIPGVLMGVWLLAAASVIARRRDFPFSPRATIARVFSTLRDAIFALMMPVIILGGIVAGVVTPTEAGVIAVVYAAVVGLFVYREMRLADLWRVVCESTISSGLILLMVAASGTFSWLVANMAIGDTLVTFFTSLTDSRWVMLMVINVFFLIWGLALEPPVALVTMVPLLVPLANAYHIDLIHLGVVVVLNLMIGQLTPPSGVVTFLTAQIAGAPLAAVFREATPFMLALIVLLLLITYVPAIALWLPALLMGGHG*