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SCNpilot_expt_1000_bf_scaffold_430_curated_22

Organism: scnpilot_dereplicated_Burkholderiales_4

near complete RP 52 / 55 MC: 2 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(23867..24415)

Top 3 Functional Annotations

Value Algorithm Source
dTDP-4-dehydrorhamnose 3,5-epimerase (EC:5.1.3.13); K01790 dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] similarity KEGG
DB: KEGG
  • Identity: 52.4
  • Coverage: 170.0
  • Bit_score: 163
  • Evalue 6.50e-38
dTDP-4-dehydrorhamnose 3,5-epimerase {ECO:0000313|EMBL:ABM56477.1}; EC=5.1.3.13 {ECO:0000313|EMBL:ABM56477.1};; TaxID=391735 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Verminephrobacter.;" source="Verminephrobacter eiseniae (strain EF01-2).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 52.4
  • Coverage: 170.0
  • Bit_score: 163
  • Evalue 2.90e-37
dTDP-4-dehydrorhamnose 3,5-epimerase n=1 Tax=Verminephrobacter eiseniae (strain EF01-2) RepID=A1WFS0_VEREI similarity UNIREF
DB: UNIREF100
  • Identity: 52.4
  • Coverage: 170.0
  • Bit_score: 163
  • Evalue 2.10e-37

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Taxonomy

Verminephrobacter eiseniae → Verminephrobacter → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 549
ATGAGGCTGCGCACGGCGCACCCCAGCGGATGGGCGCTCTTCGAATCGCTCGTGCATCGCGACGAGCGCGGCTGGCTCACCGAGTCGATGCGCCTCGATGCATTGCAGGCGCATGCCGGTCCGGTGGCGATCGTGCAGCAGAACCTCAGCCGCAGCCGGCACGGCGTGCTGCGCGGGCTGCACTACCAGCTCGGCGCTCCGCAGGGCAAGCTGGTGCAGGTCCTGCAGGGGCGCGTGCGCGACGTGATCGTCGACCTGCGGCGCCGCTCGCCGACTTTCGGGATCGGCTTCGTCTTCGAGCTGGACGCGGACGATCCGACCCCGCTGTGGGTGCCGCCGGGCTTCGCGCACGGCTTCCTCGCCCGCGAAGACAGCCTGGTGTCGTACGCGATGACGCAGGCGCGCGATGCGCAAGCCGAACGCACCATGCGCTGGAATTCTCCGGCGCTGGCCATCGACTGGCAGCTCGAGGGCATCGAACCGGTCCTGTCGCCGCGCGACCGCGACGCCCCGGCGTTCGGCGAGGCGGAAGTGTTCGAAGCGCAGTGA
PROTEIN sequence
Length: 183
MRLRTAHPSGWALFESLVHRDERGWLTESMRLDALQAHAGPVAIVQQNLSRSRHGVLRGLHYQLGAPQGKLVQVLQGRVRDVIVDLRRRSPTFGIGFVFELDADDPTPLWVPPGFAHGFLAREDSLVSYAMTQARDAQAERTMRWNSPALAIDWQLEGIEPVLSPRDRDAPAFGEAEVFEAQ*