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SCNpilot_expt_500_p_scaffold_413_curated_23

Organism: scnpilot_dereplicated_Caedibacter_2

near complete RP 52 / 55 BSCG 51 / 51 ASCG 12 / 38
Location: 18756..20336

Top 3 Functional Annotations

Value Algorithm Source
Protein translocase subunit SecD {ECO:0000256|HAMAP-Rule:MF_01463}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 88.2
  • Coverage: 526.0
  • Bit_score: 916
  • Evalue 2.20e-263
Preprotein translocase subunit SecD id=4468765 bin=GWC2_Alphaproteobacteria_42_16 species=Oceanibaculum indicum genus=Oceanibaculum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good + similarity UNIREF
DB: UNIREF100
  • Identity: 55.7
  • Coverage: 531.0
  • Bit_score: 576
  • Evalue 3.00e-161
secD; preprotein translocase subunit SecD; K03072 preprotein translocase subunit SecD similarity KEGG
DB: KEGG
  • Identity: 53.8
  • Coverage: 532.0
  • Bit_score: 544
  • Evalue 3.00e-152

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Taxonomy

Candidatus Caedibacter acanthamoebae → Caedibacter → Rickettsiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1581
ATGCTAACTCTTGCTCGTTGGAAAGTTATTACATCGCTGGTTTTATGTGTACTGAGTTTGATTTATGCATTCCCTAATTTTATAGGTGATGAAGGCCTTAAAAAAATTCCTTCTTGGCTACCTCATGAAAGAGTGAACTTAGGTCTAGATCTGCAAGGTGGTTCTCATTTATTACTTGAAGTAGATGTTAAAGCTGGCCTAAAAGAACGGCTTTCTTTTACGCTTGATGCTTTGCGAAAAACATTACGAGCGGAAAAAATTGGCTATTTAGATCTTTCTTTAGATCCAACAGGAGATTTTATTACCTTTCAACTTCGTGATCCCAACCAAGCTGAAAAAATTATTTCTATGATCAAAAAGATGGATAGTGAGCTTGAGGCTACCTTAGAAGAAAAGGGCTGTAAAGTTACTTTTACGAAAGCTTCTATTGCAGAACGCAAACGTAGTATTGTCGACCAATCAATTGAAATTGTACGTCGAAGAATTGACGAATTAGGAACAAAAGAACCTAGCATTCAGCGCCAAGGAGACGATCGCATCCTTATTCAGATTCCAGGACTTTCAGATCCTGGTCGCATTAAGAATCTGCTCGGGAAGACGGCAAAAATGACGTTTCATCTTGTTCATGAGGAACAACCTTACGCTTCTAAAGTGGATGATATCACACCGCCCGGAACAGAAATTCTTCCAAGCGAAGATGTGCGTCAAGATGGTCGAAAGATCTTCTATGTTTTGCGTAAAGAGAGTCTTCTTGGAGGAGAAAGTCTTATCGATGCTGGGGTGAATTTTGATGAATATCATCGACCTCAAGTTTCATTTCGATTTGATCCTTTGGGTGCAAAGAAATTTGGAGATATAACCACTAAAAATATCCATAGACAACTTGCTATTGTGCTTGATGGAAAAGTTATAAGCGCTCCGACAATTCAAACACCAATTACGGGAGGAAATGGCGTTATCACAGGGAAATTTACCGTCCAAGAAGCAAATGATCTTGCTCTTTTAATGCGGGCAGGTGCGCTTGTGGCTCCGCTTCTTGTTCTTGAAGAACGGACTGTTGGACCAGATTTAGGTGCAGACTCTATTGCTTCCGGAAGATACGCAACCATTTTATCTGTTATCATGGTCGCAGTTTTCATGCTGATTGCTTATTCTCTGTTTGGTTTTTTTGCAAATGTTGCTATGTTGTTCAACCTTATTTTAACGATTGCAGTTCTCTCTCTGATAGGGGCAACTTTAACATTACCAGGTATTGCTGGTATCGCTCTTACAATGGGGATGGCTGTTGATGCCAACGTTCTTATTAATGAGCGTATTAAGGAAGAACTTCGACATGGTCGAAAAATGTTTTCTGCAATTGATGTTGGATACCGCCAAGCGATGAATACAATTCTGGATTCGAACCTGACAACTCTTATTGGAGCGGCGGCACTTTTCTTTTTCGGAACAGGTCCTGTAAAAGGATTTGGAATAACGCTTGCGATTGGTATTTTAATTTCCATGTTTACAGCAACGACACTAAGTCGTGTTTTTGTCACTTACTGGGTAAATTGGTCAAAACCGGCCAAACTTCCTATTTAA
PROTEIN sequence
Length: 527
MLTLARWKVITSLVLCVLSLIYAFPNFIGDEGLKKIPSWLPHERVNLGLDLQGGSHLLLEVDVKAGLKERLSFTLDALRKTLRAEKIGYLDLSLDPTGDFITFQLRDPNQAEKIISMIKKMDSELEATLEEKGCKVTFTKASIAERKRSIVDQSIEIVRRRIDELGTKEPSIQRQGDDRILIQIPGLSDPGRIKNLLGKTAKMTFHLVHEEQPYASKVDDITPPGTEILPSEDVRQDGRKIFYVLRKESLLGGESLIDAGVNFDEYHRPQVSFRFDPLGAKKFGDITTKNIHRQLAIVLDGKVISAPTIQTPITGGNGVITGKFTVQEANDLALLMRAGALVAPLLVLEERTVGPDLGADSIASGRYATILSVIMVAVFMLIAYSLFGFFANVAMLFNLILTIAVLSLIGATLTLPGIAGIALTMGMAVDANVLINERIKEELRHGRKMFSAIDVGYRQAMNTILDSNLTTLIGAAALFFFGTGPVKGFGITLAIGILISMFTATTLSRVFVTYWVNWSKPAKLPI*