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SCNpilot_expt_500_p_scaffold_874_curated_30

Organism: scnpilot_dereplicated_Caedibacter_2

near complete RP 52 / 55 BSCG 51 / 51 ASCG 12 / 38
Location: comp(33369..34355)

Top 3 Functional Annotations

Value Algorithm Source
Ribosomal RNA small subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_01007}; EC=2.1.1.199 {ECO:0000256|HAMAP-Rule:MF_01007};; 16S rRNA m(4)C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01007}; rRNA (cytosine-N(4)-)-methyltransferase RsmH {ECO:0000256|HAMAP-Rule:MF_01007}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 73.6
  • Coverage: 322.0
  • Bit_score: 467
  • Evalue 1.30e-128
mraW; S-adenosyl-dependent methyltransferase; K03438 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199] similarity KEGG
DB: KEGG
  • Identity: 57.6
  • Coverage: 304.0
  • Bit_score: 341
  • Evalue 2.40e-91
Ribosomal RNA small subunit methyltransferase H n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7Z8M4_AZOL4 similarity UNIREF
DB: UNIREF100
  • Identity: 57.6
  • Coverage: 304.0
  • Bit_score: 341
  • Evalue 7.60e-91

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Taxonomy

Candidatus Caedibacter acanthamoebae → Caedibacter → Rickettsiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 987
ATGGTATGGAAAGCACCTTCTTCTCACGTGTCAAACAATTCCCATGTCCCTGTTATGTTGCAAGAAGTTTTGACTTCTCTTGCGTTGCATGAAGAAGGAATTTATGTCGATGGCACGTTTGGCATGGGAGGTTACTCGCAGGCTATTTTGAAGCACGCGTCTTGTAAGGTTTTTGGAATTGATCGTGATCCTGAAGCCGTCCAACTTGGTTATGAATTAGAAAAAGAAAATCCAAATTTCCACATCCTTCATGGGCGTTTTAGCCAAATGAAAGAACTTCTTGAAGGGAAGGGCATAAAGGAAGTTGATGGAATTGCATTAGACCTTGGTGTTTCATCCCCCCAACTTGATCAAAGTAAACGCGGTTTTTCATTTAGATTTGACGGGCCCTTGGATATGCGTATGAGTCAAGAAGGGCTTTCTGCAGAAGATGTTGTGAATCAATATTCTGAGGCTCAACTAAGCGATATTATTTATACTTACGGAGAAGAACGTCTTGCGAGACGTGTGGCGCGCACGATTGTAAAAGCACGTGCTCAAGAAAAAATTACAACGACATTGCAACTTGCAGAAATCGTTCGGTCCGTTGTGCCGAGAAGCCGAGATGGAATCGATCCGGCAACGCGCACTTTTCAAGGGCTTAGAATTTATGTCAATCGTGAGCTTGAAGAACTTTCACAAGGCTTGCAAGCAGCCGAAGATTTGCTAGCGCCAGGCGGTCATTTGGTTGTGGTTAGTTTTCATTCACTAGAAGATCGAATTGTAAAAGATTTTTTCAGAAAAAAATCTCAAACATCAAGGCCAATATCCCGTCATCTACCAAGTTCCCCAACAGTTAATGACGCAACTTTGAAGATCTTAACAACAAAACCTCTGCAAGCAACTATAGAAGAGATGCAGGATAATCCTCGTTCGCGTTCAGCGAAATTAAGAGCTGCAGAAAAAATAAATATTACCATAGAAAGACAAGGAGAGCTTTCACTATGA
PROTEIN sequence
Length: 329
MVWKAPSSHVSNNSHVPVMLQEVLTSLALHEEGIYVDGTFGMGGYSQAILKHASCKVFGIDRDPEAVQLGYELEKENPNFHILHGRFSQMKELLEGKGIKEVDGIALDLGVSSPQLDQSKRGFSFRFDGPLDMRMSQEGLSAEDVVNQYSEAQLSDIIYTYGEERLARRVARTIVKARAQEKITTTLQLAEIVRSVVPRSRDGIDPATRTFQGLRIYVNRELEELSQGLQAAEDLLAPGGHLVVVSFHSLEDRIVKDFFRKKSQTSRPISRHLPSSPTVNDATLKILTTKPLQATIEEMQDNPRSRSAKLRAAEKINITIERQGELSL*