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SCNpilot_expt_500_p_scaffold_2908_curated_11

Organism: scnpilot_dereplicated_Caedibacter_1

near complete RP 52 / 55 BSCG 51 / 51 MC: 1 ASCG 11 / 38 MC: 2
Location: comp(8964..9854)

Top 3 Functional Annotations

Value Algorithm Source
LysR family transcriptional regulator n=1 Tax=Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1) RepID=F2J0L5_POLGS similarity UNIREF
DB: UNIREF100
  • Identity: 31.2
  • Coverage: 285.0
  • Bit_score: 122
  • Evalue 8.60e-25
LysR family transcriptional regulator n=1 Tax=Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1) RepID=F2J0L5_POLGS similarity UNIREF
DB: UNIREF100
  • Identity: 31.2
  • Coverage: 285.0
  • Bit_score: 122
  • Evalue 8.60e-25
Uncharacterized protein {ECO:0000313|EMBL:AIL13908.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 79.1
  • Coverage: 296.0
  • Bit_score: 471
  • Evalue 8.10e-130

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Taxonomy

Candidatus Caedibacter acanthamoebae → Caedibacter → Rickettsiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 891
ATGAAAATCAGTGACTTAAGTAAGCTAATTTATTTCAAAGAAGCTGCCCAAGTACTCAGTTATACAAAAGCGGGACAAAGACTAAATACTACCCCTTCTAGTGTTCAAAGGGCTGTTAAAGCGCTTGAAGATGATCTTGGACACAAGCTTTTTGTACGCAAATGGAAAGGGTTAGCTTTAACGCCAGAAGGAAAAATGTACCTTGATAGAGTACTTAAAGCCCTTAAAGAATTACAGCTTGCAGAAAAAGAATTAGATGCAAAAAAGCAAACCCCTTTAAACAAATTAAAAATATTAACAACTCTAGGTTTAGCTGCTGACTGGGTCTATAAAATTATCCCTATTATTCAGGAGGCACATCCCTATCTAAAAATTGAAATGTGCACCTCTAATCTCGAAGTTTCGCTAGAATCTGAAGAATTTGATATATACATAGGCCCAAAAACGGAATCTGCAATTAGTTATAGGTGTAAATTTATAACAAATGTTGACTTTAAACTATATGCAAGTAAGCAATACTTGGAAAAATATGGACACCCAAAAAATAAAGCTGAATTAAAGAGGCATAAATTAATAAATTTCTCAGGCTCAAATCTAACTTACTTTGCAGATACAAATGAAATATTTGCTGATTTAGGAGATTATGAAAATTACCATTTAACTGTTGATTTCTATTTGGTTGAGCGACGCCTTGTTCAAAGTAATTTAGGAATTGCCTCTATTGCAAAAGATATAGTTGAGGCTAATTATAAAGAGTTAGTCGATATATTTCCCACTGAAAAGCCTATATCAGTACCAATATATGTTTATCATTTAGCCAAAAATTTGGATGAGCACACCGTACAGATAATATACGATGCGCTCATTCAAGTATCACCTTACCACCGTTAG
PROTEIN sequence
Length: 297
MKISDLSKLIYFKEAAQVLSYTKAGQRLNTTPSSVQRAVKALEDDLGHKLFVRKWKGLALTPEGKMYLDRVLKALKELQLAEKELDAKKQTPLNKLKILTTLGLAADWVYKIIPIIQEAHPYLKIEMCTSNLEVSLESEEFDIYIGPKTESAISYRCKFITNVDFKLYASKQYLEKYGHPKNKAELKRHKLINFSGSNLTYFADTNEIFADLGDYENYHLTVDFYLVERRLVQSNLGIASIAKDIVEANYKELVDIFPTEKPISVPIYVYHLAKNLDEHTVQIIYDALIQVSPYHR*