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SCNpilot_expt_500_p_scaffold_256_curated_26

Organism: scnpilot_dereplicated_Caedibacter_1

near complete RP 52 / 55 BSCG 51 / 51 MC: 1 ASCG 11 / 38 MC: 2
Location: comp(30806..31348)

Top 3 Functional Annotations

Value Algorithm Source
Shikimate kinase {ECO:0000256|HAMAP-Rule:MF_00109}; Short=SK {ECO:0000256|HAMAP-Rule:MF_00109};; EC=2.7.1.71 {ECO:0000256|HAMAP-Rule:MF_00109};; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 95.6
  • Coverage: 180.0
  • Bit_score: 346
  • Evalue 1.80e-92
Shikimate kinase {ECO:0000256|HAMAP-Rule:MF_00109}; Short=SK {ECO:0000256|HAMAP-Rule:MF_00109};; EC=2.7.1.71 {ECO:0000256|HAMAP-Rule:MF_00109};; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 95.6
  • Coverage: 180.0
  • Bit_score: 346
  • Evalue 1.80e-92
aroK; shikimate kinase; K00891 shikimate kinase [EC:2.7.1.71] similarity KEGG
DB: KEGG
  • Identity: 48.9
  • Coverage: 176.0
  • Bit_score: 178
  • Evalue 2.50e-42

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Taxonomy

Candidatus Caedibacter acanthamoebae → Caedibacter → Rickettsiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 543
ATGCGCACGTCGAAATTGATTATATTACCCAAAACTCTCACTCTTGTGGGAATGATGGGCGTTGGAAAAACAAGCATAGGGAGAAAGCTTGCAAAACAGTTAAGTGTACAATTTAAAGACTCAGATCAAGAGGTTGAAGTTGCAGCAGGGCAAACTGTTGCAAACATTTTTGCGTGGTATGGAGAACAAGCATTTCGTGATACTGAGCGTCGTATTGTTTCACGTTTATTAATGGAGCGTCCACATATACTATCAACTGGTGTTGAAGCTTTTATTATGCCCGAGACACGTAAAATTATAAAAGAGAATTCTTATTCTATTTGGCTTAAAGCGTCTGTTGATACCATACTTCCGAGAGTTGAACGTCGTACACATAGGCCGCAACTAGAAAAAGGAGATAAAAAAGAAATTCTTAAGAATCTTATTGAAAGTTATAATCCAATTTATGCAGAAGCTGATATTCACATCGATTGCGATGATCAAGCTCCAGACTTAACTGTAGATAAGATTATAGAAGAATTGGCTGAAAGGTTTTGGAAGTGA
PROTEIN sequence
Length: 181
MRTSKLIILPKTLTLVGMMGVGKTSIGRKLAKQLSVQFKDSDQEVEVAAGQTVANIFAWYGEQAFRDTERRIVSRLLMERPHILSTGVEAFIMPETRKIIKENSYSIWLKASVDTILPRVERRTHRPQLEKGDKKEILKNLIESYNPIYAEADIHIDCDDQAPDLTVDKIIEELAERFWK*