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SCNpilot_bf_inoc_scaffold_556_curated_16

Organism: scnpilot_dereplicated_Clostridiales_1

near complete RP 49 / 55 MC: 5 BSCG 51 / 51 MC: 4 ASCG 14 / 38 MC: 4
Location: 14785..18255

Top 3 Functional Annotations

Value Algorithm Source
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=1156417 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caloranaerobacter.;" source="Caloranaerobacter azorensis H53214.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 46.3
  • Coverage: 999.99
  • Bit_score: 1063
  • Evalue 0.0
transcription-repair coupling factor; K03723 transcription-repair coupling factor (superfamily II helicase) [EC:3.6.4.-] similarity KEGG
DB: KEGG
  • Identity: 45.1
  • Coverage: 999.99
  • Bit_score: 1049
  • Evalue 0.0
Transcription-repair-coupling factor n=1 Tax=Alkaliphilus metalliredigens (strain QYMF) RepID=A6TJM9_ALKMQ similarity UNIREF
DB: UNIREF100
  • Identity: 45.1
  • Coverage: 999.99
  • Bit_score: 1049
  • Evalue 0.0

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Taxonomy

Caloranaerobacter azorensis → Caloranaerobacter → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 3471
ATGAATACTTTTTTAAGCAACCTTTTTGAACATTCAGTTGAGATTAAAACATTAATTAAGAGCATTGATGAAGGCATCAGTCCTATTCTGATTCATGGAAGTGAGCCGCAGGTCATAAAATGGGTTGCTGCGAAGGTCAATCAATCCTTGGACAGGCCAGTCGTGGTCCTATTTGAGGATGAACACAAGGCGAGAACTGCTGCTGAGGAGTACGAGGAGGCGGTTTATCTACCAAGCCGGGAATTGGTCTGGTTTGATACCTTTGCACACTCTAATCAGGTGGCCATTGATCGAGTTGAGGCCTTAGCAACTGCTTTAAGTACCAAAGCACCCGTTATTTTTGCTTCTGTGAACAGCTTGGTTTATCGATACCCAACAAAGCTTTCAGAACGTCTACTCATCGATCTGTCAACTGAGATTCCACTGGCTGATTTACAAAAGAAGCTATATATGTATGGGTATGAACGCGTAGAAATCGTAGAGTCAAAGGGTCAATACAGCCTTAGAGGTGGTATATTTGACGTTTTCTCTCCTTTATATGAAAGACCCTTCAGGATTGAATTTTTTGGAGACGAGGTCGACTCCATTCGTGATTTTGACATTGAAACCCAAAAGTCAGTGGATAAATTTGAAACCGTTTGGCTTTATCCAGCACGAGAAATGGTACTTTCCGATGAGCGAATTGAAACGGCAATACAAGCTTTAAAAAGCATCAAGGGGAAATATAAGCAAGAGAAAAGAGAGCGTATTGAGGAGATGATAGAGCATCTGACCGAGCGCGTTTTTGTCGATGGCATCGAAAGGTATTTTCCTTTTTTCTTTGAGCATAGCATGTCGCTTCTAGATTGGTTTGAAGAGCCAGTTGTCTTTCTTGTCGGCAACAATCAGTGCGTCAGTCGAATGAATCAGTTTCTACAAGACTATAGAAAGCAATTCTCCGATTATCTTGAGCGTGGTGAGGTTATTTCTGAGCAGTATAAACGTGTTTTTGAGTTTGAAGAAATTAAATCTGAGCTTGCCTTAAGACAGCTTGTCAGCTCAGAGCTTTTAATCAAACATACAGATGGCTTTGAACCTAGCCAAATTGTAAAATTGACTTCCCGAGAAATGAACAAATACTTTGGTAAGTTTGATCAAATTGCATTAGATTTGAGAAAGTGGAAGATCAAAGGATATCATATTTTGATCGCATTTACCAATGAGGACCGTATGATGCGATTCATCGATGCGATGAACAGCTTTGAGGTTACGGTCAATCAAGCTGGTGACGCTGACCGAGTTATGAGTGGTCAAGCGATTGCCATTATGAAACCATTTTCAAGCGGCTTCTATTTTGACACGTTTAAGGGATTGCTTTTAACTGAAGCAGAGCTCTATGGTGAAGGAAAGAAAATTTCAAGAAAGAAGCCTGCTCAGGGCAAGGTGATTAAAGCCTTTAGTGAGCTTTCAGTGGGGGATTTCGTCGTACACGAAAGTCATGGTGTTGGTCAGTACCTTGGCATTGAACAGATGAAAATCGATCAAACGCGAAAAGACTTCCTTAAACTGAGATATGCTCAGGATGATTATTTGTATATACCGGTTGAAAGCGCTGGTTTGGTTCAAAAGTATATGGGGACTGATGCTGAAAAGCTGAAGCTCAACCGCTTAGGTGGACAGGAATGGAAGAAGACCAAGTCGAGAGCCAAAAAAGCTATAGAAGATATGACCGATGAACTGATTGCGCTTTATGCCAGCCGTCGTGAAAAGAAAGGATATGCCTTTTCATCTGATAATGATTGGCAGCGAGAGTTTGAAGCCTTGTTCCCATATCAAGAAACCAGAGATCAGCTTAAGTGTATCGATGAAATTAAGTTTGATATGGAAAAGGCAGAGCCAATGGAACGTCTTTTATGTGGCGATGTTGGATATGGAAAGACAGAGGTGGCCATAAGGGCAGCTTTTAAAGCCGTTTTAGATTCCAAGCAGGTAGCGATCTTAGTGCCGACCACCATATTGGCTCAGCAGCACTTTAAAAATATTTCAGAGCGTTTTTCAAAGTACCCTGCCAACATCCAGATGATTTCTAGATTTAGAACCAAGGCAGAGCAAGCTAAAATCATTAAGGATTTAAAGAGTGGGGTTGTAGACGTCGTTGTAGGTACTCACAGAATACTATCAAATGATGTGGTATTTAAGGATTTGGGTCTTCTCGTTATAGATGAGGAGCAAAGGTTTGGCGTTAAGCACAAGGAAAAAATCAAGCAGATGAAGGAAAACATCGACGTATTGACTTTGACGGCGACACCGATACCTAGAACGCTGCACATGTCTATGATTGGCATCAGAGATATGAGTGTTATAGAAGATCCACCGGAAGACAGATACCCAATACAGACGTATGTGGTTGAGTTTGATGAAAACTTAGTACGGGAAGCGATAGCGAGAGAGCTTGAACGCGGTGGGCAGGTTTACTTTGTTCACAACCGTATTGAAGATATCGATCGCGTTGCAGCAAAGATTCAAGAGCTGGTTCCGGAGGCGCTCGTGCATTATGCGCATGGTCAGATGAACGAGCATCAGCTAGAGCGTTTGATGGTCGACTTTATGAACAATGATTTTAATGTTCTGGTTTCAACAACCATTATTGAGACAGGCTTAGATATTTCTAATGTTAACACCATCATTATTAACGATGGTGATCGATTTGGCTTATCCCAGCTATATCAGCTAAGAGGTCGTGTGGGTAGAAGCAATCGACTTGCGTACTGTTATATCTTTTATCAAGAGAACAAGGTTTTAAGTGAGATCGCTGAAAAGCGACTTAAGGCAATTAAAGAGTTCACAGAGCTGGGGGCAGGCTTTAAGATTGCCATGCGCGACCTTGAAATCAGAGGCGCTGGTAATGTGCTGGGAACCGAACAGCACGGCTATATGGAAGCCATCGGATATGACCTTTATTGTAAATTGCTTGAAGAAAGTGTTCTGCATAAGAAAGGTGAAGTGGTAAAAGAGAAGCCACAGGCTAAAATAGACTTCGCTGTTAATGCTTTTATTCCAGAAAACTACATCAGTAATCATCAGCTGAAAATTGAAATCTATAAAAAAATAGCTGCAATTGAGTCTAGAAAGGACCTTGAAATGGTCTATGAAGAGATTGAAGACCGTTTTGGTACGGTTCCAACCTCTGTTGATAACCTGATTAAAATTGCATTCATAAAGGCACTTAGTGAAGCGATTGGCGTCGAAGAGGTTTCTGAGGATGGCAGCGCCTTTACACTTAAATTCGCGCCAAACTATGCGATCAGTCCACTGTTTATCAGTCAGGTACTCGACTATGATAACAAAAATGTTAGTTTCTTCGCGGGTAATCCAGCGCTTCTAAAGGTTAAAATTACAAACAGATTAAGAAAAAAAGAAGAACAATTAACAATGCTTGAAATGTATCTTGAAAAAATATATAGTTTTCATAGTGAATATTTAAATATATAA
PROTEIN sequence
Length: 1157
MNTFLSNLFEHSVEIKTLIKSIDEGISPILIHGSEPQVIKWVAAKVNQSLDRPVVVLFEDEHKARTAAEEYEEAVYLPSRELVWFDTFAHSNQVAIDRVEALATALSTKAPVIFASVNSLVYRYPTKLSERLLIDLSTEIPLADLQKKLYMYGYERVEIVESKGQYSLRGGIFDVFSPLYERPFRIEFFGDEVDSIRDFDIETQKSVDKFETVWLYPAREMVLSDERIETAIQALKSIKGKYKQEKRERIEEMIEHLTERVFVDGIERYFPFFFEHSMSLLDWFEEPVVFLVGNNQCVSRMNQFLQDYRKQFSDYLERGEVISEQYKRVFEFEEIKSELALRQLVSSELLIKHTDGFEPSQIVKLTSREMNKYFGKFDQIALDLRKWKIKGYHILIAFTNEDRMMRFIDAMNSFEVTVNQAGDADRVMSGQAIAIMKPFSSGFYFDTFKGLLLTEAELYGEGKKISRKKPAQGKVIKAFSELSVGDFVVHESHGVGQYLGIEQMKIDQTRKDFLKLRYAQDDYLYIPVESAGLVQKYMGTDAEKLKLNRLGGQEWKKTKSRAKKAIEDMTDELIALYASRREKKGYAFSSDNDWQREFEALFPYQETRDQLKCIDEIKFDMEKAEPMERLLCGDVGYGKTEVAIRAAFKAVLDSKQVAILVPTTILAQQHFKNISERFSKYPANIQMISRFRTKAEQAKIIKDLKSGVVDVVVGTHRILSNDVVFKDLGLLVIDEEQRFGVKHKEKIKQMKENIDVLTLTATPIPRTLHMSMIGIRDMSVIEDPPEDRYPIQTYVVEFDENLVREAIARELERGGQVYFVHNRIEDIDRVAAKIQELVPEALVHYAHGQMNEHQLERLMVDFMNNDFNVLVSTTIIETGLDISNVNTIIINDGDRFGLSQLYQLRGRVGRSNRLAYCYIFYQENKVLSEIAEKRLKAIKEFTELGAGFKIAMRDLEIRGAGNVLGTEQHGYMEAIGYDLYCKLLEESVLHKKGEVVKEKPQAKIDFAVNAFIPENYISNHQLKIEIYKKIAAIESRKDLEMVYEEIEDRFGTVPTSVDNLIKIAFIKALSEAIGVEEVSEDGSAFTLKFAPNYAISPLFISQVLDYDNKNVSFFAGNPALLKVKITNRLRKKEEQLTMLEMYLEKIYSFHSEYLNI*