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SCNpilot_bf_inoc_scaffold_539_curated_4

Organism: scnpilot_dereplicated_Clostridiales_1

near complete RP 49 / 55 MC: 5 BSCG 51 / 51 MC: 4 ASCG 14 / 38 MC: 4
Location: 1486..2112

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L4 n=1 Tax=Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a) RepID=K0B2W4_CLOA9 similarity UNIREF
DB: UNIREF100
  • Identity: 68.8
  • Coverage: 208.0
  • Bit_score: 283
  • Evalue 2.00e-73
rplD; 50S ribosomal protein L4 similarity KEGG
DB: KEGG
  • Identity: 68.8
  • Coverage: 208.0
  • Bit_score: 283
  • Evalue 6.40e-74
50S ribosomal protein L4 {ECO:0000256|HAMAP-Rule:MF_01328}; TaxID=1128398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Gottschalkia.;" source="Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 68.8
  • Coverage: 208.0
  • Bit_score: 283
  • Evalue 2.90e-73

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Taxonomy

Gottschalkia acidurici → Gottschalkia → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 627
GTGCCTAAATTAGAAATATTAAACGTTTCAGGACAAAAAGTAAGCGAAATCGAATTAAACGATAATGTTTTCGGTATAGAGCCAAATATTCCTGTAATGCATGAAGTAGTAAAAAACTACTTGGCTAACCAAAGACAGGGAACTCAATCTGCTAAAACTAGAGCAGAAGTAACTGGTGGTGGTAGAAAGCCATTCAGACAAAAAGGAACAGGTAACGCGAGACAAGGTTCTATTACAGCACCTAACCACGTTGGTGGTGGTGTGGTATTTGCACCGAAACCAAGAAGCTATAGATACACATTACCTAAAAAGGTAAGAAGATTAGCACTTAGATCTGCTTTCAGTGCTAAAGTTATGGACAATGAAATGATCGTTCTTGATGAATTGACATTAGCTGCTCCAAAAACAAAAGAAATGGTATCTATCTTAAACAACATTAAAGTAGCTGGTAAGAAAGTGCTTATCGTTACTGAAGGTGTTGAGAAAAATGTTGTAAGTGCTACAAACAATATCGATGGTGTTAAAACAACTTTCGTTGGTGAAATCAACGTATACGATATCTTAAATCACGATTATTTTGTAGTAACTAAAGAAGCTGTTAAGAAATTTGAGGAGGTGTATGCATAA
PROTEIN sequence
Length: 209
VPKLEILNVSGQKVSEIELNDNVFGIEPNIPVMHEVVKNYLANQRQGTQSAKTRAEVTGGGRKPFRQKGTGNARQGSITAPNHVGGGVVFAPKPRSYRYTLPKKVRRLALRSAFSAKVMDNEMIVLDELTLAAPKTKEMVSILNNIKVAGKKVLIVTEGVEKNVVSATNNIDGVKTTFVGEINVYDILNHDYFVVTKEAVKKFEEVYA*