ggKbase home page

SCNpilot_cont_300_bf_scaffold_147_curated_20

Organism: scnpilot_dereplicated_Devosia_5

near complete RP 52 / 55 MC: 2 BSCG 51 / 51 ASCG 12 / 38
Location: comp(18888..19898)

Top 3 Functional Annotations

Value Algorithm Source
16S RNA G1207 methylase RsmC; K00564 16S rRNA (guanine1207-N2)-methyltransferase [EC:2.1.1.172] similarity KEGG
DB: KEGG
  • Identity: 45.5
  • Coverage: 312.0
  • Bit_score: 276
  • Evalue 9.70e-72
Putative ribosomal RNA small subunit methyltransferase C n=1 Tax=Magnetospirillum gryphiswaldense MSR-1 v2 RepID=V6EVV8_9PROT similarity UNIREF
DB: UNIREF100
  • Identity: 45.3
  • Coverage: 329.0
  • Bit_score: 286
  • Evalue 3.90e-74
Ribosomal RNA small subunit methyltransferase C {ECO:0000313|EMBL:KIL98886.1}; TaxID=272627 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum magnetotacticum MS-1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 45.2
  • Coverage: 332.0
  • Bit_score: 292
  • Evalue 1.00e-75

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Magnetospirillum magnetotacticum → Magnetospirillum → Rhodospirillales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1011
ATGCCGCAGACTGTTTACGACGTGATCGCCCTCCCCTTCGAGGAAGGACTGCTCGAGGCGCGGAATGCCTTCCTGCTGCGCGGCGATTTCAGCCCCGCTCTGCGCGACAGCTTTGGCGGCCACCTCGTCGCCGAGCAGACCTATCGCCCTGCCTACGAGCGCCTCGCGGCAGGCGGCGTGCAGGTCACGACGCAGCTCGAGGGCAGCTATGATGTCGGGCTTTGCGTGCTCACGCCGCACCGGCAGGAGAACTACGCCAACCTGGCGCGCGCCTATCGCCTGCTGGCACCGGGCGGCACACTGGTCTGCGCCGGCCAGAACGCCGTCGGCGCCGCCACCTACGAGAAAGCCGTCGGCGCCATCGCCCCGCTCGAAGGTCGGATATCGAAGGCCAAGTGCCGGGTGTTCTGGCTGCGACGCGGCTCCGCCGAAGCCGACAGCGCCAGATGGCGGGAATGGCTGTCGCTGGGCGATCCGCAGCCGATCGCCGGCACGCCGTTCAGCACGCGGCCCGGCATCTTCAGCTGGAACCGCATCGACCCGGGCTCGCAGTTCCTCGTCGACAGCCTGCCGCCAGGGATCGACGGCGCCGTCGCCGACCTTGGCGCCGGCTGGGGCTTTCTCGCCGCATCGCTGTTGCAGCGCTATGACCGCATCCGCCAGCTCGATCTGTTCGAGGCCGAAAAGCTCGCGCTCGACCTCGCCCAGGCGAACCTCGCGCCATCAGGACGCTCGGTTGGCTACCACTGGTCCGACGTGCGGGCGGGCATCGGGCGCAGCAAATATGACTGGGTCATCACCAACCCGCCCTTCCACAAGGAAGGCGAGCAGGACATCGATCTGGGCGTGACCTTCCTCACCGTCGCCGCCGAGGCCCTGCGCGGCGGCGGCAGGCTGGTCTGCGTCGCCAACCGCCACCTTCCCTACGAGCGGACGCTGCGCACCGCCTTCTCCGACGTTTCGGTGCTGGCGGAGAATCGCGGCTTCAAGGTGCTGCTGGCGCGGAAATAG
PROTEIN sequence
Length: 337
MPQTVYDVIALPFEEGLLEARNAFLLRGDFSPALRDSFGGHLVAEQTYRPAYERLAAGGVQVTTQLEGSYDVGLCVLTPHRQENYANLARAYRLLAPGGTLVCAGQNAVGAATYEKAVGAIAPLEGRISKAKCRVFWLRRGSAEADSARWREWLSLGDPQPIAGTPFSTRPGIFSWNRIDPGSQFLVDSLPPGIDGAVADLGAGWGFLAASLLQRYDRIRQLDLFEAEKLALDLAQANLAPSGRSVGYHWSDVRAGIGRSKYDWVITNPPFHKEGEQDIDLGVTFLTVAAEALRGGGRLVCVANRHLPYERTLRTAFSDVSVLAENRGFKVLLARK*