ggKbase home page

SCNpilot_cont_300_bf_scaffold_1226_curated_10

Organism: scnpilot_dereplicated_Epilithonimonas_1

near complete RP 53 / 55 MC: 10 BSCG 51 / 51 MC: 6 ASCG 13 / 38 MC: 2
Location: comp(10264..10539)

Top 3 Functional Annotations

Value Algorithm Source
Helix-turn-helix-domain containing protein, AraC type n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X5J9_FLAB3 similarity UNIREF
DB: UNIREF100
  • Identity: 48.4
  • Coverage: 93.0
  • Bit_score: 89
  • Evalue 2.50e-15
Helix-turn-helix-domain containing protein, AraC type {ECO:0000313|EMBL:CDN76580.1}; TaxID=1117645 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Elizabethkingia anophelis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 92.3
  • Coverage: 91.0
  • Bit_score: 170
  • Evalue 1.60e-39
AraC family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 48.4
  • Coverage: 93.0
  • Bit_score: 89
  • Evalue 7.80e-16

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Elizabethkingia anophelis → Elizabethkingia → Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 276
ATGTTCAGGTTATTTATATTGCTTTTGGTTTCCACTGCGGAATTATGGGTTGCGCAGAGCACAGACAATGTGGCCTATCATCAGATCAGAAAAAAGTATGATCACCAGAAGGTTAATGATACTACAGCACTTTCTTACGTTGACCTTTTAATTGCCCTCTCGAAAAAAGAAAAAAATTATTCCGAATTAACATATGCATACCAAGATGCCCTGAATTTTGAGTCATCAGGATACCACAAAATGCTGTATGCAGACAGTGCAATAACTTCCGCTTAG
PROTEIN sequence
Length: 92
MFRLFILLLVSTAELWVAQSTDNVAYHQIRKKYDHQKVNDTTALSYVDLLIALSKKEKNYSELTYAYQDALNFESSGYHKMLYADSAITSA*