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scnpilot_p_inoc_scaffold_307_curated_47

Organism: scnpilot_dereplicated_Flavobacterium_2

near complete RP 53 / 55 MC: 3 BSCG 51 / 51 ASCG 15 / 38 MC: 1
Location: 47527..48249

Top 3 Functional Annotations

Value Algorithm Source
tRNA pseudouridine synthase C {ECO:0000313|EMBL:CDS97252.1}; EC=5.4.99.26 {ECO:0000313|EMBL:CDS97252.1};; TaxID=403776 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. PM2-P1-29.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 62.8
  • Coverage: 226.0
  • Bit_score: 303
  • Evalue 3.10e-79
pseudouridine synthase; K06175 tRNA pseudouridine65 synthase [EC:5.4.99.26] similarity KEGG
DB: KEGG
  • Identity: 63.9
  • Coverage: 227.0
  • Bit_score: 300
  • Evalue 4.50e-79
Pseudouridine synthase n=1 Tax=Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896) RepID=D2QPA6_SPILD similarity UNIREF
DB: UNIREF100
  • Identity: 63.9
  • Coverage: 227.0
  • Bit_score: 300
  • Evalue 1.40e-78

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Taxonomy

Sphingobacterium sp. PM2-P1-29 → Sphingobacterium → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 723
ATGTTAGAGATTATTTACCAGGACGATTATTTAGTGGCAATCAACAAACCGCACGGGCTTTTGGTGCACCAGTCTCCTATTGCAAGGGATGCTTCCGAATTTGCGATTCAGCTGCTGCGGGATCAGATCGGCAAAAAAGTATATCCTGTTCATAGGATTGACCGTAAAACGTCCGGCATATTGCTTTTTGCACTGGATAAGGAAGTAAATAAAAGTCTGACGGAACAGCTCACCTTAAAAACCGTTGAAAAAAAGTACTGGGCCATCGTGAGAGGGTTTACTCCGGAGGAATTGCACATCGACTATCCGTTATATAAAGACAACGGTGTGCTACAGGAAGCACAGACTACCATCAAAACGCTGGCACAAACAGTATTGCCCATTCCGTCCGGAAAACACGATACTTCCCGGTATTCCTTTATAGAGGCTTCCCCGTTAACCGGTAGAATGCACCAGATCCGCAAACACCTGGCGCATGTTTTACACCCGATTATCGGCGACCGTCCTCACGGCTGTAACAAGCAAAACAAGATATGGCTTGAAAAATTTGAAATGAATACGATGCTGTTGCATGCTCAAAAACTGGTTTTTACACATCCTGTTACAACTAAAGAAGTGGTGCTTACCGCCCGTCCGCATAAAGAATTTCTAAGATCGGCCGGTATATTGGGTTTTGAAATGGATAAAACCGGTGGGGTTACTGCTGCAGTATCAGAAAATTAA
PROTEIN sequence
Length: 241
MLEIIYQDDYLVAINKPHGLLVHQSPIARDASEFAIQLLRDQIGKKVYPVHRIDRKTSGILLFALDKEVNKSLTEQLTLKTVEKKYWAIVRGFTPEELHIDYPLYKDNGVLQEAQTTIKTLAQTVLPIPSGKHDTSRYSFIEASPLTGRMHQIRKHLAHVLHPIIGDRPHGCNKQNKIWLEKFEMNTMLLHAQKLVFTHPVTTKEVVLTARPHKEFLRSAGILGFEMDKTGGVTAAVSEN*