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scnpilot_p_inoc_scaffold_63_curated_44

Organism: scnpilot_dereplicated_Flavobacterium_2

near complete RP 53 / 55 MC: 3 BSCG 51 / 51 ASCG 15 / 38 MC: 1
Location: 43921..44451

Top 3 Functional Annotations

Value Algorithm Source
Ribosome maturation factor RimM n=1 Tax=Flavobacterium psychrophilum (strain JIP02/86 / ATCC 49511) RepID=RIMM_FLAPJ similarity UNIREF
DB: UNIREF100
  • Identity: 81.6
  • Coverage: 174.0
  • Bit_score: 305
  • Evalue 3.30e-80
  • rbh
Ribosome maturation factor RimM {ECO:0000256|HAMAP-Rule:MF_00014, ECO:0000256|SAAS:SAAS00055369}; TaxID=1453498 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium aquatile LMG 4008.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 80.5
  • Coverage: 174.0
  • Bit_score: 309
  • Evalue 2.40e-81
rimM; 16S rRNA processing protein RimM; K02860 16S rRNA processing protein RimM similarity KEGG
DB: KEGG
  • Identity: 81.6
  • Coverage: 174.0
  • Bit_score: 305
  • Evalue 1.00e-80

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Taxonomy

Flavobacterium aquatile → Flavobacterium → Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 531
ATGCGTAAAGAAGATTGTTTCTATTTAGGTAAAATCGCTAAAAAATTTAGTTTCAAAGGGGAAGTTCTGGCTTATTTAGACACGGACGAACCGGAGATGTATGAAGATATGGAATCGGTTTTTGTTGAATTCAACAAAAACCTGGTTCCATTTTTCATTGAAAGCAGTTCGCTGCACAAAAACGATTTCCTGCGTATCCGCTTTGAAGATATTAACAGCGAAGAAGAAGCAGACAAACTACTGGGCTGCGAATTATACCTTCCGTTAACCATGCTTCCGAAACTGGAAGGAAACAAGTTTTACTTTCATGAAGTAATCGGTTTTGATGTGGAAGACAGCCGTTTGGGCGTTATTGGTAAAATCGTATCGATCAATGACAGTACCGCACAGCCGCTTTTTGAAATCCTTAATGGCGAAACGGAGATTTTAGTACCAATGATTGATAATTTCATTGTTAAAATTGACCGTGAGAACAGTAAAGTAGTCATGGATATCCCTGAAGGTTTAGTCGATTTATATCTGAACAGCTAA
PROTEIN sequence
Length: 177
MRKEDCFYLGKIAKKFSFKGEVLAYLDTDEPEMYEDMESVFVEFNKNLVPFFIESSSLHKNDFLRIRFEDINSEEEADKLLGCELYLPLTMLPKLEGNKFYFHEVIGFDVEDSRLGVIGKIVSINDSTAQPLFEILNGETEILVPMIDNFIVKIDRENSKVVMDIPEGLVDLYLNS*