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scnpilot_p_inoc_scaffold_4665_curated_10

Organism: scnpilot_dereplicated_Hydrogenophaga_1

near complete RP 50 / 55 MC: 1 BSCG 49 / 51 MC: 3 ASCG 12 / 38
Location: comp(7393..7947)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MUE0_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 99.5
  • Coverage: 184.0
  • Bit_score: 360
  • Evalue 8.90e-97
RNA polymerase sigma factor RpoD {ECO:0000256|HAMAP-Rule:MF_00963}; Sigma-70 {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.5
  • Coverage: 184.0
  • Bit_score: 360
  • Evalue 1.30e-96
rpoD; RNA polymerase sigma-70 factor; K03086 RNA polymerase primary sigma factor similarity KEGG
DB: KEGG
  • Identity: 95.7
  • Coverage: 184.0
  • Bit_score: 350
  • Evalue 3.80e-94

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Taxonomy

Hydrogenophaga sp. PBC → Hydrogenophaga → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 555
GCCACCTGGTGGATCCGCCAGGCCATCACGCGCTCGATCGCCGACCAGGCGCGCACCATCCGCATCCCGGTGCACATGATCGAGACCATCAACAAGATGAACCGCATCAGCCGCCAGCACCTGCAGGAGTTCGGCTTCGAGCCCGATGCGTCCATCCTGGCCGAGAAGATGGAGATGCCCGAGGACAAGATCCGCAAGATCATGAAGATCGCCAAGGAGCCGATCTCCATGGAAACGCCGATCGGCGACGACGACGATTCGCACCTGGGCGACTTCATCGAGGACACCACCAACACCGCCCCCATCGAGGCCGCCATGCAGGCTGGCCTGCGCGAAGTGGTGAAGGAAATCCTGGACAGCCTCACGCCGCGCGAAGCCAAGGTGCTGCGCATGCGCTTCGGCATCGAGATGTCCACCGACCACACGCTGGAAGAAGTGGGCAAGCAGTTCGACGTCACGCGCGAACGCATCCGCCAGATCGAGAGCAAGGCGGTGCGCAAGCTCAAGCACCCGAGCCGCAGCGACAAGCTGCGCAGCTTCATCGACTCGCTCTGA
PROTEIN sequence
Length: 185
ATWWIRQAITRSIADQARTIRIPVHMIETINKMNRISRQHLQEFGFEPDASILAEKMEMPEDKIRKIMKIAKEPISMETPIGDDDDSHLGDFIEDTTNTAPIEAAMQAGLREVVKEILDSLTPREAKVLRMRFGIEMSTDHTLEEVGKQFDVTRERIRQIESKAVRKLKHPSRSDKLRSFIDSL*