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scnpilot_p_inoc_scaffold_1589_curated_8

Organism: scnpilot_dereplicated_Hydrogenophaga_1

near complete RP 50 / 55 MC: 1 BSCG 49 / 51 MC: 3 ASCG 12 / 38
Location: comp(7728..8687)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor RpoH n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MQU0_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 90.6
  • Coverage: 319.0
  • Bit_score: 573
  • Evalue 1.50e-160
RNA polymerase sigma factor RpoH {ECO:0000256|HAMAP-Rule:MF_00961}; RNA polymerase sigma-32 factor {ECO:0000256|HAMAP-Rule:MF_00961}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 90.6
  • Coverage: 319.0
  • Bit_score: 573
  • Evalue 2.10e-160
RNA polymerase sigma-32 subunit RpoH; K03089 RNA polymerase sigma-32 factor similarity KEGG
DB: KEGG
  • Identity: 78.2
  • Coverage: 317.0
  • Bit_score: 490
  • Evalue 3.10e-136

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Taxonomy

Hydrogenophaga sp. PBC → Hydrogenophaga → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 960
ATGTCCCATTCGCTGATTCCTGTGGCCGCTGCGCCGAGCAGCGATCTGGCCGTGGCCGGTTCCTGGTCGAACCGCTCGCTCACGCTGCCGCCGCTGGGCAATCTGGACGCCTACATTTCCGCCGTGAACCGCCTGCCCCTGCTCAGCCTGGAGGAGGAACAGGACGCGGCGCGCCGCCTGCGCGACCACAACGACCTGGACGCCGCCGGGCGCCTGGTCCTGTCGCACCTGCGGTTGGTCGTCTCCATCTCCCGCCAGTACCTGGGCTATGGCCTGCCGCACGGCGACCTGATCCAGGAAGGCAACGTGGGCCTGATGAAGGCCGTCAAGCGCTTCGACCCTGAGCAGGGCGTGCGCCTGGTGAGCTACGCCATCCACTGGATCAAGGCCGAGATCCACGAGTACATCCTGAAGAACTGGCGCATGGTCAAGCTGGCCACGACCAAGGCCCAGCGCAAGCTGTTCTTCAACCTGCGCTCGCGCAAGCAGGGCCTTCGCGCCGAAGCCGCCGACGGCGACACCCACCGCGAGGTGCTGAGCGACGCCGAAGTGGGCCTGGTGGCGCGTGAACTGAACGTCAAGCCCGACGAGGTGCGCGAGATGGAAACGCGCCTGGCCGGCGGCGACGTCGTGCTGGACCCGGGGCCGGGTGACGACGGCGAAGAGGCGTTCGGCCCCATCGCCTATCTGGCCGACCAAACGCAAGAGCCCACGGCGGTGCTGGAATCGGCCCAGCGCGACCGGCTCGCCACCGAAGGCGTGGCGCAGGCCATGGGCGAGCTGGACGAGCGCTCGCGCCGCATCGTGAGCGAGCGCTGGCTCAAGGTGAACGACGACGGCTCGGGGGGCATGACCCTGCACGAACTGGCCGCCGAGTACGGCGTGAGCGCCGAGCGCATCCGTCAGATCGAGGTGGCGGCCATGAAAAAGATGCGCAAGGCGCTCGCCGCCTACGCCTGA
PROTEIN sequence
Length: 320
MSHSLIPVAAAPSSDLAVAGSWSNRSLTLPPLGNLDAYISAVNRLPLLSLEEEQDAARRLRDHNDLDAAGRLVLSHLRLVVSISRQYLGYGLPHGDLIQEGNVGLMKAVKRFDPEQGVRLVSYAIHWIKAEIHEYILKNWRMVKLATTKAQRKLFFNLRSRKQGLRAEAADGDTHREVLSDAEVGLVARELNVKPDEVREMETRLAGGDVVLDPGPGDDGEEAFGPIAYLADQTQEPTAVLESAQRDRLATEGVAQAMGELDERSRRIVSERWLKVNDDGSGGMTLHELAAEYGVSAERIRQIEVAAMKKMRKALAAYA*