ggKbase home page

scnpilot_p_inoc_scaffold_17426_curated_3

Organism: scnpilot_dereplicated_Hydrogenophaga_1

near complete RP 50 / 55 MC: 1 BSCG 49 / 51 MC: 3 ASCG 12 / 38
Location: comp(2453..2959)

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L10 n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MSP1_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 92.9
  • Coverage: 168.0
  • Bit_score: 292
  • Evalue 2.70e-76
50S ribosomal protein L10 {ECO:0000256|HAMAP-Rule:MF_00362, ECO:0000256|RuleBase:RU003636}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 92.9
  • Coverage: 168.0
  • Bit_score: 292
  • Evalue 3.80e-76
rplJ; 50S ribosomal protein L10; K02864 large subunit ribosomal protein L10 similarity KEGG
DB: KEGG
  • Identity: 87.5
  • Coverage: 168.0
  • Bit_score: 276
  • Evalue 6.40e-72

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Hydrogenophaga sp. PBC → Hydrogenophaga → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 507
TTGAGTCTGAATCGCAGTGAGAAAGAAGCGGTCATCACCGAAGTGACCGGCCTCGCCGCCAAAGCTCAAACCCTCGTGATGGCGGAGTACCGCGGCATCACGGTCGCTTCCATGGACAAGCTGCGCGTGAGCGCCCGCAACAGCGGCGTGAGCCTGAGTGTGTTGAAAAACACCCTGGCCCGTCGTGCGGTCGCCGGCAGCCCGTTCGAGGTGGTGGCCGAGCAGATGGCCGGCCCGCTCGTCTACGGCTTCTCCGAAGACCCCGTGGCCGCCGCGAAAGTGGTGGCCGATTTCGCGAAGACCAACGACAAGCTGGTCATCCGCGGCGGTGTCTACGCGGGCAAAGCCCTGGACGTCGACGGTGTGAAGCAGCTCGCCAGCATCCCCTCGAAAGAGGTCCTGCTCGCGCAGCTTTGTGGCCTGCTCAAGTCGCCGATCTCGCGCACCGCGGTGGTGCTCGGCGCGCTGGCCAAGAAAAAAGGCGAAGGCGAAACGGCTGCCGCCTGA
PROTEIN sequence
Length: 169
LSLNRSEKEAVITEVTGLAAKAQTLVMAEYRGITVASMDKLRVSARNSGVSLSVLKNTLARRAVAGSPFEVVAEQMAGPLVYGFSEDPVAAAKVVADFAKTNDKLVIRGGVYAGKALDVDGVKQLASIPSKEVLLAQLCGLLKSPISRTAVVLGALAKKKGEGETAAA*