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scnpilot_p_inoc_scaffold_2252_curated_10

Organism: scnpilot_dereplicated_Hydrogenophaga_1

near complete RP 50 / 55 MC: 1 BSCG 49 / 51 MC: 3 ASCG 12 / 38
Location: comp(11092..11418)

Top 3 Functional Annotations

Value Algorithm Source
Integration host factor subunit alpha n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MNX9_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 108.0
  • Bit_score: 210
  • Evalue 6.70e-52
Integration host factor subunit alpha {ECO:0000256|HAMAP-Rule:MF_00380, ECO:0000256|SAAS:SAAS00062113}; Short=IHF-alpha {ECO:0000256|HAMAP-Rule:MF_00380};; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 108.0
  • Bit_score: 210
  • Evalue 9.50e-52
ihfA; integration host factor subunit alpha; K04764 integration host factor subunit alpha similarity KEGG
DB: KEGG
  • Identity: 86.1
  • Coverage: 108.0
  • Bit_score: 180
  • Evalue 3.10e-43

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Taxonomy

Hydrogenophaga sp. PBC → Hydrogenophaga → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 327
ATGGAACTGGCCGTCGAAAGCCTGGAAACCCCCGCCCTCACCAAGGCGCAGCTCGCCGAGCTGCTGTTCGACCAGATCGGCCTGAACAAGCGGGAATCCAAGGACATGATCGACGCCTTCTTCGATCTCATCACCGAGAGCCTGGTCAATGGCACGGACGTGAAGATCTCGGGCTTCGGCAACTTCCAGATCCGCACCAAGGCGGCCCGCCCGGGCCGCAACCCGCGCACCGGCGAACCGGTGGCCATCCAGGCCCGGCGGGTTGTCACTTTCCACGCCAGTCCCAAGCTCAAGGAGCAGGTGCAGGCGGCGGTCATCGGCGGCTGA
PROTEIN sequence
Length: 109
MELAVESLETPALTKAQLAELLFDQIGLNKRESKDMIDAFFDLITESLVNGTDVKISGFGNFQIRTKAARPGRNPRTGEPVAIQARRVVTFHASPKLKEQVQAAVIGG*